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Hist3h2bb-ps Pseudogene Detail
Summary
  • Symbol
    Hist3h2bb-ps
  • Name
    histone cluster 3, H2bb, pseudogene
  • Synonyms
    4930534G10Rik
  • Feature Type
    pseudogene
  • IDs
    MGI:1922442
    NCBI Gene: 382522
  • Member of
    Hist3 cluster
  • Gene Overview
    MyGene.info: HIST3H2BB
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:58954048-58954512 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 36.38 cM, cytoband B2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    82 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922442
pseudogene Chr11:58954048-58954512 (-)
129S1/SvImJ MGP_129S1SvImJ_G0010730
pseudogene Chr11:58735835-58736299 (-)
A/J MGP_AJ_G0010725
pseudogene Chr11:56495557-56496021 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0010698
pseudogene Chr11:56862573-56863037 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0010973
pseudogene Chr11:60612054-60612518 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0009602
pseudogene Chr11:53768853-53769317 (-)
CAST/EiJ MGP_CASTEiJ_G0010432
pseudogene Chr11:58400758-58401222 (-)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0010638
pseudogene Chr11:55821192-55821656 (-)
LP/J MGP_LPJ_G0010710
pseudogene Chr11:59351683-59352147 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0010613
pseudogene Chr11:64411623-64412087 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0010946
pseudogene Chr11:58400903-58401367 (-)
PWK/PhJ MGP_PWKPhJ_G0010326
pseudogene Chr11:56758474-56758938 (-)
SPRET/EiJ MGP_SPRETEiJ_G0010136
pseudogene Chr11:58208799-58209263 (-)
WSB/EiJ MGP_WSBEiJ_G0010489
pseudogene Chr11:58086071-58086535 (-)



Homology
more
  • Human Ortholog
    HIST3H2BB, histone cluster 3 H2B family member b
  • Vertebrate Orthologs
    7
  • Human Ortholog
    HIST3H2BB, histone cluster 3 H2B family member b
    Orthology source: HomoloGene
  • Synonyms
    H2Bb
  • Links
    NCBI Gene ID: 128312
    neXtProt AC: NX_Q8N257
    UniProt: Q8N257

  • Chr Location
    1q42.13; chr1:228458107-228458558 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 382522 NCBI Gene Model | MGI Sequence Detail 465 C57BL/6J ±  kb
transcript NR_134309 RefSeq | MGI Sequence Detail 465 C57BL/6  
polypeptide Q8CGP0 UniProt | EBI | MGI Sequence Detail 126 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    Genomic 1
    cDNA 3

    Microarray probesets 1
Other
Accession IDs
less
MGI:2144712
References
more
  • Summaries
    All 19
    Phenotypes 3
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:131436 Golas A, et al., Gene mapping of sperm quality parameters in recombinant inbred strains of mice. Int J Dev Biol. 2008;52(2-3):287-93

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory