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4930542C16Rik Gene Detail
Summary
  • Symbol
    4930542C16Rik
  • Name
    RIKEN cDNA 4930542C16 gene
  • Synonyms
    1700010J08Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1922413
    NCBI Gene: 75163
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:24597266-24617467 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 14.47 cM, cytoband B
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    122 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922413
lncRNA gene Chr14:24597266-24617467 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005522
lincRNA gene Chr14:17555307-17565913 (-)
A/J MGP_AJ_G0005508
lincRNA gene Chr14:17124574-17135172 (-)
AKR/J MGP_AKRJ_G0005487
lincRNA gene Chr14:17741953-17752446 (-)
BALB/cJ MGP_BALBcJ_G0005490
lincRNA gene Chr14:17218427-17229034 (-)
C3H/HeJ MGP_C3HHeJ_G0005437
lincRNA gene Chr14:17668974-17679557 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005645
lincRNA gene Chr14:18125488-18136115 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005019
lincRNA gene Chr14:17324411-17335067 (-)
CAST/EiJ MGP_CASTEiJ_G0005379
lincRNA gene Chr14:17522845-17533223 (-)
CBA/J MGP_CBAJ_G0005426
lincRNA gene Chr14:19025069-19035680 (-)
DBA/2J MGP_DBA2J_G0005442
lincRNA gene Chr14:16935202-16945809 (-)
FVB/NJ MGP_FVBNJ_G0005468
lincRNA gene Chr14:16799472-16810077 (-)
LP/J MGP_LPJ_G0005526
lincRNA gene Chr14:17836162-17846780 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005452
lincRNA gene Chr14:18738452-18749725 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005645
lincRNA gene Chr14:17539825-17550432 (-)
PWK/PhJ MGP_PWKPhJ_G0005330
lincRNA gene Chr14:16532681-16544314 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005248
lincRNA gene Chr14:17363793-17374682 (-)
WSB/EiJ MGP_WSBEiJ_G0005429
lincRNA gene Chr14:17533469-17543952 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048628 Ensembl Gene Model | MGI Sequence Detail 20202 C57BL/6J ±  kb
transcript ENSMUST00000212108 Ensembl | MGI Sequence Detail 1207 Not Applicable  
polypeptide Q9D4X8 UniProt | EBI | MGI Sequence Detail 115 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
Other
Accession IDs
less
MGI:1922736
References
more
  • Summaries
    All 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory