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Csmd2os Gene Detail
Summary
  • Symbol
    Csmd2os
  • Name
    CUB and Sushi multiple domains 2, opposite strand
  • Synonyms
    4930465A12Rik
  • Feature Type
    antisense lncRNA gene
  • IDs
    MGI:1922239
    NCBI Gene: 74989
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:128134652-128164180 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 61.67 cM, cytoband D2.2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    345 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922239
antisense lncRNA gene Chr4:128133523-128166967 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003960
antisense lncRNA gene Chr4:129926171-129963061 (-)
A/J MGP_AJ_G0003941
antisense lncRNA gene Chr4:124801472-124835174 (-)
AKR/J MGP_AKRJ_G0003918
antisense lncRNA gene Chr4:128240394-128275421 (-)
BALB/cJ MGP_BALBcJ_G0003927
antisense lncRNA gene Chr4:125377202-125411634 (-)
C3H/HeJ MGP_C3HHeJ_G0003874
antisense lncRNA gene Chr4:128301655-128337148 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004075
antisense lncRNA gene Chr4:134864095-134897605 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003562
antisense lncRNA gene Chr4:117926941-117961318 (-)
CAST/EiJ MGP_CASTEiJ_G0003837
antisense lncRNA gene Chr4:126453697-126491062 (-)
CBA/J MGP_CBAJ_G0003867
antisense lncRNA gene Chr4:138139345-138172931 (-)
DBA/2J MGP_DBA2J_G0003883
antisense lncRNA gene Chr4:125234796-125268312 (-)
FVB/NJ MGP_FVBNJ_G0003902
antisense lncRNA gene Chr4:123931450-123965261 (-)
LP/J MGP_LPJ_G0003963
antisense lncRNA gene Chr4:130220002-130262927 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003890
antisense lncRNA gene Chr4:143104065-143140588 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004070
antisense lncRNA gene Chr4:128611315-128645463 (-)
PWK/PhJ MGP_PWKPhJ_G0003791
antisense lncRNA gene Chr4:121774207-121808997 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003737
antisense lncRNA gene Chr4:124470814-124511249 (-)
WSB/EiJ MGP_WSBEiJ_G0003873
antisense lncRNA gene Chr4:128715017-128750581 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Csmd2os
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 74989 NCBI Gene Model | MGI Sequence Detail 29529 C57BL/6J ±  kb
transcript AK015502 GenBank | EMBL | DDBJ | MGI Sequence Detail 644 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/20/2020
MGI 6.16
The Jackson Laboratory