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Qtrt2 Gene Detail
Summary
  • Symbol
    Qtrt2
  • Name
    queuine tRNA-ribosyltransferase accessory subunit 2
  • Synonyms
    3110012M05Rik, 4930470H18Rik, Qrtr2, Qtrtd1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922194
    NCBI Gene: 106248
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:43861407-43889680 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 28.44 cM, cytoband B4
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    93 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922194
protein coding gene Chr16:43861407-43926809 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022830
protein coding gene Chr16:42577612-42641650 (-)
A/J MGP_AJ_G0022795
protein coding gene Chr16:40659233-40724576 (-)
AKR/J MGP_AKRJ_G0022767
protein coding gene Chr16:41979883-42042441 (-)
BALB/cJ MGP_BALBcJ_G0022796
protein coding gene Chr16:40650634-40716528 (-)
C3H/HeJ MGP_C3HHeJ_G0022560
protein coding gene Chr16:42161109-42225667 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023243
protein coding gene Chr16:43569712-43636874 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020758
protein coding gene Chr16:40725664-40787162 (-)
CAST/EiJ MGP_CASTEiJ_G0022086
protein coding gene Chr16:42369362-42432520 (-)
CBA/J MGP_CBAJ_G0022531
protein coding gene Chr16:45398880-45475232 (-)
DBA/2J MGP_DBA2J_G0022663
protein coding gene Chr16:40395681-40458864 (-)
FVB/NJ MGP_FVBNJ_G0022638
protein coding gene Chr16:40370568-40432061 (-)
LP/J MGP_LPJ_G0022731
protein coding gene Chr16:42291470-42360123 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022657
protein coding gene Chr16:44809930-44879132 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023258
protein coding gene Chr16:41993656-42060488 (-)
PWK/PhJ MGP_PWKPhJ_G0021826
protein coding gene Chr16:40791136-40852062 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021657
protein coding gene Chr16:41888396-41957177 (-)
WSB/EiJ MGP_WSBEiJ_G0022130
protein coding gene Chr16:42090991-42157175 (-)



Homology
more
  • Human Ortholog
    QTRT2, queuine tRNA-ribosyltransferase accessory subunit 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    QTRT2, queuine tRNA-ribosyltransferase accessory subunit 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    QTRTD1
  • Links
    NCBI Gene ID: 79691
    neXtProt AC: NX_Q9H974
    UniProt: Q9H974

  • Chr Location
    3q13.31; chr3:114056735-114088422 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 41576
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: QTRT2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 106248 NCBI Gene Model | MGI Sequence Detail 28274 C57BL/6J ±  kb
transcript NM_001356328 RefSeq | MGI Sequence Detail 3067 C57BL/6  
polypeptide B8ZXI1 UniProt | EBI | MGI Sequence Detail 415 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000029704 queuine tRNA-ribosyltransferase accessory subunit 2
  • PDB
  • InterPro Domains
    IPR028592 Queuine tRNA-ribosyltransferase accessory subunit QTRTD1
    IPR036511 Queuine tRNA-ribosyltransferase-like
    IPR002616 tRNA-guanine(15) transglycosylase-like
Molecular
Reagents
less
  • All nucleic 36
    cDNA 36

    Microarray probesets 6
Other
Accession IDs
less
MGI:1920363, MGI:2146475
References
more
  • Summaries
    All 34
    Gene Ontology 4
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/14/2019
MGI 6.14
The Jackson Laboratory