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Slc35f6 Gene Detail
Summary
  • Symbol
    Slc35f6
  • Name
    solute carrier family 35, member F6
  • Synonyms
    4930471M23Rik, 5730478O19Rik, p40, Tango9
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922169
    NCBI Gene: 74919
  • Gene Overview
    MyGene.info: SLC35F6
Location & Maps
more
  • Sequence Map
    Chr5:30647933-30659729 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      11797 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 16.74 cM, cytoband B1
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SLC35F6, solute carrier family 35 member F6
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SLC35F6, solute carrier family 35 member F6
    Orthology source: HGNC, HomoloGene
  • Synonyms
    ANT2BP, C2orf18, TANGO9
  • Links
    NCBI Gene ID: 54978
    neXtProt AC: NX_Q8N357

  • Chr Location
    2p23.3; chr2:26764274-26781231 (+)  GRCh38.p2

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    29 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    11
  • Chemically induced (other)
    2
  • Gene trapped
    2
  • Radiation induced
    3
  • Spontaneous
    1
  • Targeted
    3
  • Genomic Mutations
    6 involving Slc35f6
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022284 VEGA Gene Model | MGI Sequence Detail 11797 C57BL/6J ±  kb
transcript OTTMUST00000053077 VEGA | MGI Sequence Detail 3088 Not Applicable  
polypeptide OTTMUSP00000025220 VEGA | MGI Sequence Detail 372 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    68 from dbSNP Build 142
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR012404 Nucleotide-sugar transporter-related
    IPR009262 Solute carrier family 35 member SLC35F1/F2/F6
Molecular
Reagents
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  • All nucleic 15
    cDNA 15

    Microarray probesets 6
Other
Accession IDs
less
MGI:2441700
References
more
  • Summaries
    All 30
    Diseases 1
    Gene Ontology 4
    Phenotypes 29
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory