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Rab3il1 Gene Detail
Summary
  • Symbol
    Rab3il1
  • Name
    RAB3A interacting protein (rabin3)-like 1
  • Synonyms
    1200014K04Rik, Rab3ail1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922010
    NCBI Gene: 74760
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:10001674-10038380 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 6.26 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    203 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922010
protein coding gene Chr19:10001669-10038380 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024835
protein coding gene Chr19:7321843-7344625 (+)
A/J MGP_AJ_G0024803
protein coding gene Chr19:6806364-6844348 (+)
AKR/J MGP_AKRJ_G0024778
protein coding gene Chr19:7094350-7117706 (+)
BALB/cJ MGP_BALBcJ_G0024803
protein coding gene Chr19:6851404-6889087 (+)
C3H/HeJ MGP_C3HHeJ_G0024569
protein coding gene Chr19:6966154-7004398 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025251
protein coding gene Chr19:7646640-7677043 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022678
protein coding gene Chr19:7225230-7261872 (+)
CAST/EiJ MGP_CASTEiJ_G0024042
protein coding gene Chr19:6631517-6656380 (+)
CBA/J MGP_CBAJ_G0024543
protein coding gene Chr19:7718489-7743615 (+)
DBA/2J MGP_DBA2J_G0024670
protein coding gene Chr19:6833584-6858152 (+)
FVB/NJ MGP_FVBNJ_G0024637
protein coding gene Chr19:6867844-6892096 (+)
LP/J MGP_LPJ_G0024757
protein coding gene Chr19:7303148-7324416 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024664
protein coding gene Chr19:7621240-7642921 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025299
protein coding gene Chr19:7120544-7140917 (+)
PWK/PhJ MGP_PWKPhJ_G0023787
protein coding gene Chr19:6257185-6294832 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023592
protein coding gene Chr19:6292080-6328558 (+)
WSB/EiJ MGP_WSBEiJ_G0024104
protein coding gene Chr19:6983340-7020290 (+)



Homology
more
  • Human Ortholog
    RAB3IL1, RAB3A interacting protein like 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RAB3IL1, RAB3A interacting protein like 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GRAB
  • Links
    NCBI Gene ID: 5866
    neXtProt AC: NX_Q8TBN0
    UniProt: Q8TBN0

  • Chr Location
    11q12.2-q12.3; chr11:61897296-61946312 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 74760 NCBI Gene Model | MGI Sequence Detail 36707 C57BL/6J ±  kb
transcript NM_001347429 RefSeq | MGI Sequence Detail 3027 C57BL/6  
polypeptide Q8VDV3 UniProt | EBI | MGI Sequence Detail 383 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000013623 guanine nucleotide exchange factor for Rab-3A
  • InterPro Domains
    IPR009449 GDP/GTP exchange factor Sec2, N-terminal
    IPR040351 Guanine nucleotide exchange factor RAB3IL/RAB3IP/Sec2
Molecular
Reagents
less
  • All nucleic 40
    cDNA 40

    Microarray probesets 9
Other
Accession IDs
less
MGI:2147474, MGI:2147776
References
more
  • Summaries
    All 36
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 4
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:241387 Lee H, et al., A Phosphoproteomic Screen Identifies a Guanine Nucleotide Exchange Factor for Rab3A Protein as a Mitogen-activated Protein (MAP) Kinase Phosphatase-5-regulated MAP Kinase Target in Interleukin 6 (IL-6) Secretion and Myogenesis. J Biol Chem. 2017 Mar 03;292(9):3581-3590

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory