C2cd5
Gene Detail

Symbol Name ID

C2cd5 C2 calcium-dependent domain containing 5 MGI:1921991

Synonyms

5730419I09Rik, C030008B15Rik, CDP138

Feature Type

protein coding gene

Genetic Map

Chromosome 6

75.13 cM, cytoband G2
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr6:143010920-143100107 bp, - strand From NCBI annotation of GRCm38   89188 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:8873  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: C2cd5

Human homologs

Human Homolog		C2CD5, C2 calcium-dependent domain containing 5
NCBI Gene ID		9847
neXtProt AC		NX_Q86YS7
Human Synonyms		CDP138, KIAA0528
Human Chr (Location)		12p12.1; chr12:22601517-22697452 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(38) : Targeted(2) Gene trapped(36)

Gene Ontology (GO) classifications

All GO classifications: (17 annotations)

Process	cellular response to insulin stimulus, intracellular protein transmembrane transport, ...
Component	cell cortex, cytoplasmic vesicle membrane, ...
Function	calcium-dependent phospholipid binding, calcium ion binding

External Resources: FuncBase

Expression

Literature Summary: (1 records)
cDNA source data(138)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(138) cDNA(138)
Microarray probesets(4)

Other database links

Ensembl Gene Model	ENSMUSG00000030279 (Evidence)
Entrez Gene	74741 (Evidence)
UniGene	130260
DFCI	TC1575969, TC1595539, TC1597651, TC1601828
DoTS	DT.101209154, DT.101400360, DT.101738008, DT.530563, DT.55214195, DT.91336054, DT.91380374, DT.94334054, DT.97382740
NIA Mouse Gene Index	U028009
Consensus CDS Project	CCDS51951.1, CCDS51952.1, CCDS51953.1
International Mouse Knockout Project Status	C2cd5

Sequences

Length	Strain/Species
genomic	74741	NCBI Gene Model | MGI Sequence Detail	89188	C57BL/6J
transcript	NM_029081	RefSeq | MGI Sequence Detail	4343	C57BL/6
polypeptide	Q7TPS5	UniProt | EBI | MGI Sequence Detail	1016	Not Applicable

All sequences(49) RefSeq(6) UniProt(3)

Polymorphisms

SNPs(333 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR000008	C2 calcium-dependent membrane targeting
InterPro	IPR008973	C2 calcium/lipid-binding domain, CaLB
InterPro	IPR018029	C2 membrane targeting protein

Graphical View of Protein Domain Structure

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:176654 McCormick JA, et al., A SPAK Isoform Switch Modulates Renal Salt Transport and Blood Pressure. Cell Metab. 2011 Sep 7;14(3):352-64
All references(33)

Other accession IDs

MGI:1924564