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C2cd5
Gene Detail
 Symbol
Name
ID
C2cd5
C2 calcium-dependent domain containing 5
MGI:1921991
Synonyms 5730419I09Rik, C030008B15Rik, CDP138
Feature Type protein coding gene
Genetic Map
Chromosome 6
75.13 cM, cytoband G2
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr6:143010920-143100107 bp, - strand
From NCBI annotation of GRCm38

  89188 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8873  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: C2cd5

Human
homologs
Human Homolog C2CD5, C2 calcium-dependent domain containing 5
NCBI Gene ID 9847
neXtProt AC  NX_Q86YS7
Human Synonyms  CDP138, KIAA0528
Human Chr (Location)  12p12.1; chr12:22448546-22544546 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(38) : Gene trapped(36) Targeted(2)
Incidental mutations (data from APF )
Interactions
C2cd5 interacts with 206 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (28 annotations)
Process cellular response to insulin stimulus, insulin receptor signaling pathway via phosphatidylinositol 3-kinase, ...
Component cell cortex, cell projection, ...
Function calcium-dependent phospholipid binding, calcium ion binding, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(138)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(138) cDNA(138)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000030279 (Evidence)
Entrez Gene74741 (Evidence)
UniGene130260
DFCITC1575969, TC1595539, TC1597651, TC1601828
DoTSDT.101209154, DT.101400360, DT.101738008, DT.530563, DT.55214195, DT.91336054, DT.91380374, DT.94334054, DT.97382740
NIA Mouse Gene IndexU028009
Consensus CDS ProjectCCDS51951.1, CCDS51952.1, CCDS51953.1
International Mouse Knockout Project StatusC2cd5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 74741 NCBI Gene Model | MGI Sequence Detail 89188 C57BL/6J ±  kb
transcript NM_029081 RefSeq | MGI Sequence Detail 4388 C57BL/6 
polypeptide Q7TPS5 UniProt | EBI | MGI Sequence Detail 1016 Not Applicable 

For the selected sequences
All sequences(80) RefSeq(37) UniProt(3)
Polymorphisms SNPs within 2kb(684 from dbSNP Build 137)    SNPs within 2kb including multiple locations(686)
Protein-related
information
ResourceIDDescription
InterPro IPR000008 C2 calcium-dependent membrane targeting
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:176654 McCormick JA, et al., A SPAK Isoform Switch Modulates Renal Salt Transport and Blood Pressure. Cell Metab. 2011 Sep 7;14(3):352-64
All references(35)
Other
accession IDs
MGI:1924564

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory