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Tex55 Gene Detail
Summary
  • Symbol
    Tex55
  • Name
    testis expressed 55
  • Synonyms
    4930435E12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921913
    NCBI Gene: 74663
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:38812206-38828749 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 26.87 cM, cytoband B4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    98 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921913
protein coding gene Chr16:38812204-38828772 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022823
protein coding gene Chr16:37357271-37377010 (-)
A/J MGP_AJ_G0022788
protein coding gene Chr16:35509639-35527194 (-)
AKR/J MGP_AKRJ_G0022760
protein coding gene Chr16:36855699-36877117 (-)
BALB/cJ MGP_BALBcJ_G0022789
protein coding gene Chr16:35624864-35642586 (-)
C3H/HeJ MGP_C3HHeJ_G0022553
protein coding gene Chr16:36956707-36974596 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023236
protein coding gene Chr16:38216353-38235245 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020751
protein coding gene Chr16:35884076-35900730 (-)
CAST/EiJ MGP_CASTEiJ_G0022079
protein coding gene Chr16:37118883-37136320 (-)
CBA/J MGP_CBAJ_G0022524
protein coding gene Chr16:39891582-39911336 (-)
DBA/2J MGP_DBA2J_G0022656
protein coding gene Chr16:35387879-35405412 (-)
FVB/NJ MGP_FVBNJ_G0022631
protein coding gene Chr16:35412434-35429774 (-)
LP/J MGP_LPJ_G0022724
protein coding gene Chr16:37034412-37052762 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022650
protein coding gene Chr16:38979563-39000242 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023251
protein coding gene Chr16:36826363-36844336 (-)
PWK/PhJ MGP_PWKPhJ_G0021819
protein coding gene Chr16:35805300-35822577 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021650
protein coding gene Chr16:36712333-36730606 (-)
WSB/EiJ MGP_WSBEiJ_G0022123
protein coding gene Chr16:36886116-36906244 (-)



Homology
more
  • Human Ortholog
    TEX55, testis expressed 55
  • Vertebrate Orthologs
    7
  • Human Ortholog
    TEX55, testis expressed 55
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C3orf30, TSCPA
  • Links
    NCBI Gene ID: 152405
    neXtProt AC: NX_Q96M34
    UniProt: Q96M34

  • Chr Location
    3q13.32; chr3:119146150-119151455 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022798 Ensembl Gene Model | MGI Sequence Detail 16544 C57BL/6J ±  kb
transcript ENSMUST00000122078 Ensembl | MGI Sequence Detail 1367 Not Applicable  
polypeptide ENSMUSP00000113120 Ensembl | MGI Sequence Detail 381 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR040760 Protein of unknown function DUF5582
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
References
more
  • Summaries
    All 21
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:271799 Yu Z, et al., Expression profile of a novel germ cell-specific gene, TSCPA, in mice and human. J Huazhong Univ Sci Technolog Med Sci. 2009 Oct;29(5):535-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory