Fam46c
Gene Detail

Symbol Name ID

Fam46c family with sequence similarity 46, member C MGI:1921895

Synonyms

4930431B09Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 3

43.71 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr3:100451628-100489324 bp, - strand From VEGA annotation of GRCm38   37697 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:56783  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: protein FAM46
Gene Tree: Fam46c

Human homologs

Human Homolog		FAM46C, family with sequence similarity 46, member C
NCBI Gene ID		54855
neXtProt AC		NX_Q5VWP2
Human Chr (Location)		1p12; chr1:118148604-118171011 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(1) : Targeted(1)

Gene Ontology (GO) classifications

All GO classifications: (3 annotations)

Process	biological_process
Component	cellular_component
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (29)    Tissues (3)    Images (23)
Theiler Stages: 23

Assay Type	Results
RNA in situ	29

cDNA source data(8)
External Resources: GEO   ArrayExpress

Molecular reagents

All nucleic(9) Genomic(1) cDNA(8)
Microarray probesets(5)

Other database links

VEGA Gene Model	OTTMUSG00000006991 (Evidence)
Ensembl Gene Model	ENSMUSG00000044468 (Evidence)
Entrez Gene	74645 (Evidence)
NIA Mouse Gene Index	U024427
Consensus CDS Project	CCDS51017.1
International Mouse Knockout Project Status	Fam46c

Sequences

Length	Strain/Species
genomic	OTTMUSG00000006991	VEGA Gene Model | MGI Sequence Detail	37697	C57BL/6J
transcript	OTTMUST00000016176	VEGA | MGI Sequence Detail	5640	Not Applicable
polypeptide	OTTMUSP00000007410	VEGA | MGI Sequence Detail	391	Not Applicable

All sequences(27) RefSeq(3) UniProt(2)

Protein-related information

Resource	ID	Description
InterPro	IPR012937	Domain of unknown function DUF1693
Protein Ontology	PR:000030457	protein FAM46C

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(25)

Other accession IDs

MGI:2139713