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Fam46c Gene Detail
Summary
  • Symbol
    Fam46c
  • Name
    family with sequence similarity 46, member C
  • Synonyms
    4930431B09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921895
    NCBI Gene: 74645
  • Gene Overview
    MyGene.info: FAM46C
Location & Maps
more
  • Sequence Map
    Chr3:100451628-100489324 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      37697 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 43.71 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    FAM46C, family with sequence similarity 46 member C
  • Vertebrate Orthologs
    10
  • Human Ortholog
    FAM46C, family with sequence similarity 46 member C
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 54855
    neXtProt AC: NX_Q5VWP2

  • Chr Location
    1p12; chr1:117605982-117628389 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Fam46c
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006991 VEGA Gene Model | MGI Sequence Detail 37697 C57BL/6J ±  kb
transcript OTTMUST00000016176 VEGA | MGI Sequence Detail 5640 Not Applicable  
polypeptide OTTMUSP00000007410 VEGA | MGI Sequence Detail 391 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    205 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    Genomic 1
    cDNA 8

    Microarray probesets 5
Other
Accession IDs
less
MGI:2139713
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory