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Ptar1 Gene Detail
Summary
  • Symbol
    Ptar1
  • Name
    protein prenyltransferase alpha subunit repeat containing 1
  • Synonyms
    1700084D09Rik, 2010013L17Rik, 4930428J16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921875
    NCBI Gene: 72351
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:23687400-23721129 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 18.45 cM, cytoband C1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    402 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921875
protein coding gene Chr19:23686898-23732885 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024988
protein coding gene Chr19:21860116-21895063 (+)
A/J MGP_AJ_G0024965
protein coding gene Chr19:20664863-20699018 (+)
AKR/J MGP_AKRJ_G0024935
protein coding gene Chr19:21464652-21500583 (+)
BALB/cJ MGP_BALBcJ_G0024964
protein coding gene Chr19:20704502-20738854 (+)
C3H/HeJ MGP_C3HHeJ_G0024721
protein coding gene Chr19:21410830-21444553 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025405
protein coding gene Chr19:22556074-22593392 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022824
protein coding gene Chr19:20843965-20878017 (+)
CAST/EiJ MGP_CASTEiJ_G0024190
protein coding gene Chr19:21147443-21182319 (+)
CBA/J MGP_CBAJ_G0024699
protein coding gene Chr19:23541431-23575190 (+)
DBA/2J MGP_DBA2J_G0024831
protein coding gene Chr19:20673631-20707679 (+)
FVB/NJ MGP_FVBNJ_G0024792
protein coding gene Chr19:20533434-20568758 (+)
LP/J MGP_LPJ_G0024915
protein coding gene Chr19:21806197-21841141 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024819
protein coding gene Chr19:23598419-23637233 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025460
protein coding gene Chr19:21446696-21481670 (+)
PWK/PhJ MGP_PWKPhJ_G0023938
protein coding gene Chr19:20263041-20297644 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023743
protein coding gene Chr19:20678887-20712843 (+)
WSB/EiJ MGP_WSBEiJ_G0024257
protein coding gene Chr19:21479912-21516514 (+)



Homology
more
  • Human Ortholog
    PTAR1, protein prenyltransferase alpha subunit repeat containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PTAR1, protein prenyltransferase alpha subunit repeat containing 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 375743
    neXtProt AC: NX_Q7Z6K3
    UniProt: Q7Z6K3

  • Chr Location
    9q21.12; chr9:69709522-69760050 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 34254
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: PTAR1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074925 Ensembl Gene Model | MGI Sequence Detail 33730 C57BL/6J ±  kb
transcript ENSMUST00000099560 Ensembl | MGI Sequence Detail 2064 Not Applicable  
polypeptide ENSMUSP00000097156 Ensembl | MGI Sequence Detail 424 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR002088 Protein prenyltransferase, alpha subunit
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 7
Other
Accession IDs
less
MGI:1919601, MGI:1920771, MGI:2147543
References
more
  • Summaries
    All 29
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:239022 Klein AD, et al., Identification of Modifier Genes in a Mouse Model of Gaucher Disease. Cell Rep. 2016 Sep 06;16(10):2546-53

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory