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Cds1
Gene Detail
Symbol

Name
ID
Cds1
CDP-diacylglycerol synthase 1
MGI:1921846
Synonyms
4833409J18Rik, phosphatidate cytidylyltransferase
Feature Type
protein coding gene
Genetic Map
Chromosome 5
48.93 cM, cytoband E3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr5:101765130-101823858 bp, + strand
From VEGA annotation of GRCm38

  58729 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:68173  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: phosphatidate cytidylyltransferase, eukaryotic type
Gene Tree: Cds1

Human
homologs
Human Homolog CDS1, CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1
NCBI Gene ID 1040
neXtProt AC  NX_Q92903
Human Synonyms  CDS
Human Chr (Location)  4q21.23; chr4:84582904-84651340 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Gene trapped(6)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cds1 interacts with 232 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (7 records)
Data Summary: Results (382)    Tissues (138)    Images (54)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 375
Northern blot 7
cDNA source data(48)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(49) cDNA(49)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000029627 (Evidence)
Ensembl Gene ModelENSMUSG00000029330 (Evidence)
Entrez Gene74596 (Evidence)
UniGene46764
DFCITC1577464
DoTSDT.482216
EC2.7.7.41
Consensus CDS ProjectCCDS19472.1
International Mouse Knockout Project StatusCds1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029627 VEGA Gene Model | MGI Sequence Detail 58729 C57BL/6J ±  kb
transcript OTTMUST00000073500 VEGA | MGI Sequence Detail 3924 Not Applicable 
polypeptide OTTMUSP00000038040 VEGA | MGI Sequence Detail 461 Not Applicable 

For the selected sequences
All sequences(30) RefSeq(6) UniProt(1)
Polymorphisms
SNPs within 2kb(367 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000374 Phosphatidate cytidylyltransferase
InterPro IPR016720 Phosphatidate cytidylyltransferase, eukaryota
Protein Ontology PR:000005290 phosphatidate cytidylyltransferase 1
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44
All references(38)
Other
accession IDs
MGI:2140827, MGI:2141164

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory