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Cyp2j9
Gene Detail
Symbol

Name
ID
Cyp2j9
cytochrome P450, family 2, subfamily j, polypeptide 9
MGI:1921769
Synonyms
8430417E17Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 4
44.66 cM, cytoband C5
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr4:96568429-96591578 bp, - strand
From VEGA annotation of GRCm38

  23150 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:137388  Vertebrate Homology Class
1 mouse; 1 rat; 3 chicken

Protein SuperFamily: cytochrome P450 CYP2D6
Gene Tree: Cyp2j9

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cyp2j9 interacts with 50 markers (Mir15b, Mir17, Mir20a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component endoplasmic reticulum
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (181)    Tissues (108)    Images (25)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 181
cDNA source data(7)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(10) cDNA(9) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000007935 (Evidence)
Ensembl Gene ModelENSMUSG00000015224 (Evidence)
Entrez Gene74519 (Evidence)
UniGene458387
DFCITC1584746
DoTSDT.40186512
NIA Mouse Gene IndexU259536
Consensus CDS ProjectCCDS18370.1
International Mouse Knockout Project StatusCyp2j9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000007935 VEGA Gene Model | MGI Sequence Detail 23150 C57BL/6J ±  kb
transcript OTTMUST00000018003 VEGA | MGI Sequence Detail 2037 Not Applicable 
polypeptide OTTMUSP00000008267 VEGA | MGI Sequence Detail 502 Not Applicable 

For the selected sequences
All sequences(26) RefSeq(6) UniProt(4)
Polymorphisms
SNPs within 2kb(196 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001128 Cytochrome P450
InterPro IPR017972 Cytochrome P450, conserved site
InterPro IPR002401 Cytochrome P450, E-class, group I
InterPro IPR008071 Cytochrome P450, E-class, group I, CYP2J-like
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory