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Lrrc71 Gene Detail
Summary
  • Symbol
    Lrrc71
  • Name
    leucine rich repeat containing 71
  • Synonyms
    4933430H15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921735
    NCBI Gene: 74485
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:87736923-87748623 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 38.46 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    142 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921735
protein coding gene Chr3:87736923-87748625 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027366
protein coding gene Chr3:87853025-87869314 (-)
A/J MGP_AJ_G0027330
protein coding gene Chr3:84877824-84889490 (-)
AKR/J MGP_AKRJ_G0027296
protein coding gene Chr3:86931290-86943805 (-)
BALB/cJ MGP_BALBcJ_G0027339
protein coding gene Chr3:84973494-84985169 (-)
C3H/HeJ MGP_C3HHeJ_G0027082
protein coding gene Chr3:87226687-87238352 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027785
protein coding gene Chr3:91084131-91095855 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025138
protein coding gene Chr3:80497641-80509307 (-)
CAST/EiJ MGP_CASTEiJ_G0026529
protein coding gene Chr3:87444995-87456671 (-)
CBA/J MGP_CBAJ_G0027057
protein coding gene Chr3:94163240-94174894 (-)
DBA/2J MGP_DBA2J_G0027193
protein coding gene Chr3:84361129-84372818 (-)
FVB/NJ MGP_FVBNJ_G0027162
protein coding gene Chr3:82640058-82651686 (-)
LP/J MGP_LPJ_G0027301
protein coding gene Chr3:88820096-88831732 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027181
protein coding gene Chr3:100432674-100444318 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027843
protein coding gene Chr3:86701021-86712707 (-)
PWK/PhJ MGP_PWKPhJ_G0026262
protein coding gene Chr3:84163387-84175288 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026079
protein coding gene Chr3:85888943-85900599 (-)
WSB/EiJ MGP_WSBEiJ_G0026608
protein coding gene Chr3:87067135-87079297 (-)



Homology
more
  • Human Ortholog
    LRRC71, leucine rich repeat containing 71
  • Vertebrate Orthologs
    9
  • Human Ortholog
    LRRC71, leucine rich repeat containing 71
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1orf92
  • Links
    NCBI Gene ID: 149499
    neXtProt AC: NX_Q8N4P6
    UniProt: Q8N4P6

  • Chr Location
    1q23.1; chr1:156920608-156941208 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Lrrc71
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 74485 NCBI Gene Model | MGI Sequence Detail 11701 C57BL/6J ±  kb
transcript NM_028971 RefSeq | MGI Sequence Detail 3988 C57BL/6  
polypeptide Q9D3W5 UniProt | EBI | MGI Sequence Detail 558 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    Genomic 1
    cDNA 6

    Microarray probesets 4
References
more
  • Summaries
    All 25
    Diseases 1
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:236664 Scavizzi F, et al., Blastocyst genotyping for quality control of mouse mutant archives: an ethical and economical approach. Transgenic Res. 2015 Oct;24(5):921-7

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/12/2019
MGI 6.14
The Jackson Laboratory