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4933439C10Rik Gene Detail
Summary
  • Symbol
    4933439C10Rik
  • Name
    RIKEN cDNA 4933439C10 gene
  • Synonyms
    2610028M21Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1921726
    NCBI Gene: 74476
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:59396479-59402211 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 37.72 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    81 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921726
lncRNA gene Chr11:59396479-59404473 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015175
unclassified non-coding RNA gene Chr11:59347102-59355084 (+)
A/J MGP_AJ_G0015149
unclassified non-coding RNA gene Chr11:57075685-57084253 (+)
AKR/J MGP_AKRJ_G0015112
unclassified non-coding RNA gene Chr11:58988586-58996795 (+)
BALB/cJ MGP_BALBcJ_G0015111
unclassified non-coding RNA gene Chr11:57428118-57436103 (+)
C3H/HeJ MGP_C3HHeJ_G0014935
unclassified non-coding RNA gene Chr11:58852459-58860029 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015568
unclassified non-coding RNA gene Chr11:61222550-61230531 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013312
unclassified non-coding RNA gene Chr11:54320144-54327999 (+)
CAST/EiJ MGP_CASTEiJ_G0014488
unclassified non-coding RNA gene Chr11:58995581-59003429 (+)
CBA/J MGP_CBAJ_G0014914
unclassified non-coding RNA gene Chr11:63899741-63907473 (+)
DBA/2J MGP_DBA2J_G0015007
unclassified non-coding RNA gene Chr11:56745135-56753122 (+)
FVB/NJ MGP_FVBNJ_G0015019
unclassified non-coding RNA gene Chr11:56398772-56406749 (+)
LP/J MGP_LPJ_G0015088
unclassified non-coding RNA gene Chr11:59945658-59953641 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015045
unclassified non-coding RNA gene Chr11:65018585-65026567 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0015607
unclassified non-coding RNA gene Chr11:59013887-59021871 (+)
PWK/PhJ MGP_PWKPhJ_G0014280
unclassified non-coding RNA gene Chr11:57331989-57339731 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014067
unclassified non-coding RNA gene Chr11:58800991-58810558 (+)
WSB/EiJ MGP_WSBEiJ_G0014591
unclassified non-coding RNA gene Chr11:58692902-58700878 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Genomic Mutations
    1 involving 4933439C10Rik
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 74476 NCBI Gene Model | MGI Sequence Detail 5733 C57BL/6J ±  kb
transcript NR_015585 RefSeq | MGI Sequence Detail 2227 C57BL/6  
polypeptide Q3TEA0 UniProt | EBI | MGI Sequence Detail 155 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 21
    cDNA 21

    Microarray probesets 4
Other
Accession IDs
less
MGI:1923624
References
more
  • Summaries
    All 19
    Phenotypes 4
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/26/2022
MGI 6.22
The Jackson Laboratory