Zswim5
Gene Detail

Symbol Name ID

Zswim5 zinc finger SWIM-type containing 5 MGI:1921714

Synonyms

4933426E21Rik, mKIAA1511

Feature Type

protein coding gene

Genetic Map

Chromosome 4

53.37 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr4:116877376-116989264 bp, + strand From VEGA annotation of GRCm38   111889 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:18958  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Zswim5

Human homologs

Human Homolog		ZSWIM5, zinc finger, SWIM-type containing 5
NCBI Gene ID		57643
neXtProt AC		NX_Q9P217
Human Chr (Location)		1p34.1; chr1:45482074-45672250 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(2) : Targeted(1) Gene trapped(1)

Gene Ontology (GO) classifications

All GO classifications: (4 annotations)

Process	biological_process
Component	cellular_component
Function	metal ion binding, zinc ion binding

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (15)    Tissues (5)   
Theiler Stages: 20, 22

Assay Type	Results
RNA in situ	10
RT-PCR	5

cDNA source data(6)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(10) Genomic(1) cDNA(6) Primer pair(2) Other(1)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000009781 (Evidence)
Ensembl Gene Model	ENSMUSG00000033948 (Evidence)
Entrez Gene	74464 (Evidence)
DFCI	TC1597494, TC1666723, TC1716451
DoTS	DT.55144117, DT.97400397
NIA Mouse Gene Index	U004700
Consensus CDS Project	CCDS18520.1
International Mouse Knockout Project Status	Zswim5

Sequences

Length	Strain/Species
genomic	OTTMUSG00000009781	VEGA Gene Model | MGI Sequence Detail	111889	C57BL/6J
transcript	OTTMUST00000022646	VEGA | MGI Sequence Detail	5582	Not Applicable
polypeptide	OTTMUSP00000010338	VEGA | MGI Sequence Detail	1188	Not Applicable

All sequences(23) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(167 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR007527	Zinc finger, SWIM-type
Protein Ontology	PR:000032229	zinc finger SWIM domain-containing protein 5

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(32)

Other accession IDs

MGI:2140314