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Zswim5
Gene Detail
 Symbol
Name
ID
Zswim5
zinc finger SWIM-type containing 5
MGI:1921714
Synonyms 4933426E21Rik, mKIAA1511
Feature Type protein coding gene
Genetic Map
Chromosome 4
53.37 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr4:116877376-116989264 bp, + strand
From VEGA annotation of GRCm38

  111889 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18958  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Zswim5

Human
homologs
Human Homolog ZSWIM5, zinc finger, SWIM-type containing 5
NCBI Gene ID 57643
neXtProt AC  NX_Q9P217
Human Chr (Location)  1p34.1; chr1:45016402-45206578 (-)  GRCh38
Alleles
and
phenotypes
All alleles(2) : Targeted(1) Gene trapped(1)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component extracellular space
Function metal ion binding, zinc ion binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (15)    Tissues (5)   
Theiler Stages: 20, 22
Assay TypeResults
RNA in situ 10
RT-PCR 5
cDNA source data(6)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(10) Genomic(1) cDNA(6) Primer pair(2) Other(1)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000009781 (Evidence)
Ensembl Gene ModelENSMUSG00000033948 (Evidence)
Entrez Gene74464 (Evidence)
DFCITC1597494, TC1666723, TC1716451
DoTSDT.55144117, DT.97400397
NIA Mouse Gene IndexU004700
Consensus CDS ProjectCCDS18520.1
International Mouse Knockout Project StatusZswim5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000009781 VEGA Gene Model | MGI Sequence Detail 111889 C57BL/6J ±  kb
transcript OTTMUST00000022646 VEGA | MGI Sequence Detail 5582 Not Applicable 
polypeptide OTTMUSP00000010338 VEGA | MGI Sequence Detail 1188 Not Applicable 

For the selected sequences
All sequences(23) RefSeq(2) UniProt(2)
Polymorphisms SNPs within 2kb(335 from dbSNP Build 137)    SNPs within 2kb including multiple locations(337)
Protein-related
information
ResourceIDDescription
InterPro IPR007527 Zinc finger, SWIM-type
Protein Ontology PR:000032229 zinc finger SWIM domain-containing protein 5
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(33)
Other
accession IDs
MGI:2140314

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/15/2014
MGI 5.17
The Jackson Laboratory