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4933408J17Rik Gene Detail
Summary
  • Symbol
    4933408J17Rik
  • Name
    RIKEN cDNA 4933408J17 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1921704
    NCBI Gene: 74454
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr10:93589413-93605245 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 48.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    284 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921704
lncRNA gene Chr10:93589413-93605245 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017655
protein coding gene Chr10:95013823-95028316 (+)
A/J MGP_AJ_G0017634
protein coding gene Chr10:91708508-91721973 (+)
AKR/J MGP_AKRJ_G0017592
protein coding gene Chr10:94329345-94342815 (+)
BALB/cJ MGP_BALBcJ_G0017597
protein coding gene Chr10:91975430-91989396 (+)
C3H/HeJ MGP_C3HHeJ_G0017420
protein coding gene Chr10:94333821-94352214 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018054
protein coding gene Chr10:98143710-98159532 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0016985
protein coding gene Chr10:94303318-94321486 (+)
CBA/J MGP_CBAJ_G0017389
protein coding gene Chr10:102212559-102228494 (+)
DBA/2J MGP_DBA2J_G0017495
protein coding gene Chr10:90806103-90819844 (+)
FVB/NJ MGP_FVBNJ_G0017487
protein coding gene Chr10:90013888-90029366 (+)
LP/J MGP_LPJ_G0017569
protein coding gene Chr10:95634551-95651971 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017518
protein coding gene Chr10:103517749-103531290 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018091
protein coding gene Chr10:94222693-94236792 (+)
PWK/PhJ MGP_PWKPhJ_G0016766
protein coding gene Chr10:90885120-90901213 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016554
protein coding gene Chr10:93021685-93037154 (+)
WSB/EiJ MGP_WSBEiJ_G0017044
protein coding gene Chr10:94195826-94211096 (+)



Homology
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Gene Ontology
(GO)
Classifications
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 74454 NCBI Gene Model | MGI Sequence Detail 15833 C57BL/6J ±  kb
transcript NR_045810 RefSeq | MGI Sequence Detail 1859 C57BL/6  
polypeptide Q9D475 UniProt | EBI | MGI Sequence Detail 100 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 12
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory