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Fam90a1b Gene Detail
Summary
  • Symbol
    Fam90a1b
  • Name
    family with sequence similarity 90, member A1B
  • Synonyms
    4932442L08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921682
    NCBI Gene: 631145
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:94355053-94366777 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 41.56 cM, cytoband C1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    12 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921682
protein coding gene ChrX:94339903-94366937 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035910
protein coding gene ChrX:90764553-90777860 (-)
A/J MGP_AJ_G0035896
protein coding gene ChrX:90857483-90869157 (-)
AKR/J MGP_AKRJ_G0035813
protein coding gene ChrX:93257684-93269410 (-)
BALB/cJ MGP_BALBcJ_G0035880
protein coding gene ChrX:89567608-89579246 (-)
C3H/HeJ MGP_C3HHeJ_G0035589
protein coding gene ChrX:91129844-91141581 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036409
protein coding gene ChrX:93531951-93544949 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033236
protein coding gene ChrX:89014389-89026153 (-)
CAST/EiJ MGP_CASTEiJ_G0034874
protein coding gene ChrX:75800041-75811828 (-)
CBA/J MGP_CBAJ_G0035563
protein coding gene ChrX:96231624-96245443 (-)
DBA/2J MGP_DBA2J_G0035719
protein coding gene ChrX:90081518-90093051 (-)
FVB/NJ MGP_FVBNJ_G0035658
protein coding gene ChrX:89496014-89507770 (-)
LP/J MGP_LPJ_G0035808
protein coding gene ChrX:91567428-91580721 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035692
protein coding gene ChrX:100543375-100555045 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036436
protein coding gene ChrX:90474119-90485815 (-)
PWK/PhJ MGP_PWKPhJ_G0034573
protein coding gene ChrX:73570345-73582323 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034403
protein coding gene ChrX:76643176-76654890 (-)
WSB/EiJ MGP_WSBEiJ_G0035015
protein coding gene ChrX:89270985-89284132 (-)



Homology
more
  • Human Ortholog
    CXorf58, chromosome X open reading frame 58
  • Vertebrate Orthologs
    5
  • Human Ortholog
    CXorf58, chromosome X open reading frame 58
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 254158
    neXtProt AC: NX_Q96LI9
    UniProt: Q96LI9

  • Chr Location
    Xp22.11; chrX:23907932-23939520 (+)  GRCh38.p7

  • Human Ortholog
    FAM90A1, family with sequence similarity 90 member A1
    Orthology source: HomoloGene
  • Links
    NCBI Gene ID: 55138
    neXtProt AC: NX_Q86YD7
    UniProt: Q86YD7

  • Chr Location
    12p13.31; chr12:8221260-8227618 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000043549 Ensembl Gene Model | MGI Sequence Detail 11725 C57BL/6J ±  kb
transcript ENSMUST00000044989 Ensembl | MGI Sequence Detail 2939 Not Applicable  
polypeptide ENSMUSP00000043958 Ensembl | MGI Sequence Detail 419 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR039213 FAM90
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:190524 Shalom-Barak T, et al., Placental PPARgamma regulates spatiotemporally diverse genes and a unique metabolic network. Dev Biol. 2012 Dec 1;372(1):143-55

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory