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Fam90a1b Gene Detail
Summary
  • Symbol
    Fam90a1b
  • Name
    family with sequence similarity 90, member A1B
  • Synonyms
    4932442L08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921682
    NCBI Gene: 631145
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:93383509-93410513 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 41.56 cM, cytoband C1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    47 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921682
 protein coding gene ChrX:93383509-93410513 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035910
 protein coding gene ChrX:90764553-90777860 (-)
A/J MGP_AJ_G0035896
 protein coding gene ChrX:90857483-90869157 (-)
AKR/J MGP_AKRJ_G0035813
 protein coding gene ChrX:93257684-93269410 (-)
BALB/cJ MGP_BALBcJ_G0035880
 protein coding gene ChrX:89567608-89579246 (-)
C3H/HeJ MGP_C3HHeJ_G0035589
 protein coding gene ChrX:91129844-91141581 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036409
 protein coding gene ChrX:93531951-93544949 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033236
 protein coding gene ChrX:89014389-89026153 (-)
CAST/EiJ MGP_CASTEiJ_G0034874
 protein coding gene ChrX:75800041-75811828 (-)
CBA/J MGP_CBAJ_G0035563
 protein coding gene ChrX:96231624-96245443 (-)
DBA/2J MGP_DBA2J_G0035719
 protein coding gene ChrX:90081518-90093051 (-)
FVB/NJ MGP_FVBNJ_G0035658
 protein coding gene ChrX:89496014-89507770 (-)
LP/J MGP_LPJ_G0035808
 protein coding gene ChrX:91567428-91580721 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035692
 protein coding gene ChrX:100543375-100555045 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036436
 protein coding gene ChrX:90474119-90485815 (-)
PWK/PhJ MGP_PWKPhJ_G0034573
 protein coding gene ChrX:73570345-73582323 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034403
 protein coding gene ChrX:76643176-76654890 (-)
WSB/EiJ MGP_WSBEiJ_G0035015
 protein coding gene ChrX:89270985-89284132 (-)



Homology
more
  • Human Ortholog
    CXorf58, chromosome X open reading frame 58
  • Vertebrate Orthologs
    23
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CXorf58, chromosome X open reading frame 58
  • Links
    NCBI Gene ID: 254158
    neXtProt AC: NX_Q96LI9
    UniProt: Q96LI9

  • Chr Location
    Xp22.11; chrX:23907932-23939509 (+)  GRCh38
  • Human Ortholog
    FAM90A1, family with sequence similarity 90 member A1
  • Links
    NCBI Gene ID: 55138
    neXtProt AC: NX_Q86YD7
    UniProt: Q86YD7

  • Chr Location
    12p13.31; chr12:8221260-8227618 (-)  GRCh38
  • Human Ortholog
    FAM90A10, family with sequence similarity 90 member A10
  • Synonyms
    FAM90A10P
  • Links
    NCBI Gene ID: 441328
    UniProt: A6NDY2

  • Chr Location
    8p23.1; chr8:7768977-7771988 (+)  GRCh38
  • Human Ortholog
    FAM90A12, family with sequence similarity 90 member A12
  • Synonyms
    FAM90A12P
  • Links
    NCBI Gene ID: 645879
    UniProt: A8MX19

  • Chr Location
    8p23.1; chr8:8027077-8031818 (-)  GRCh38
  • Human Ortholog
    FAM90A13, family with sequence similarity 90 member A13
  • Synonyms
    FAM90A13P
  • Links
    NCBI Gene ID: 441314
    UniProt: P0C7W8

  • Chr Location
    8p23.1; chr8:7279770-7282780 (+)  GRCh38
  • Human Ortholog
    FAM90A14, family with sequence similarity 90 member A14
  • Synonyms
    FAM90A14P
  • Links
    NCBI Gene ID: 645651
    UniProt: P0C7W9

  • Chr Location
    8p23.1; chr8:7715443-7718453 (+)  GRCh38
  • Human Ortholog
    FAM90A15, family with sequence similarity 90 member A15
  • Synonyms
    FAM90A15P
  • Links
    NCBI Gene ID: 389630
    UniProt: P0C7V4

  • Chr Location
    8p23.1; chr8:7256904-7259914 (+)  GRCh38
  • Human Ortholog
    FAM90A16, family with sequence similarity 90 member A16
  • Synonyms
    FAM90A16P, FAM90A17P
  • Links
    NCBI Gene ID: 441323
    UniProt: P0DV73

  • Chr Location
    8p23.1; chr8:7730739-7733749 (+)  GRCh38
  • Human Ortholog
    FAM90A17, family with sequence similarity 90 member A17
  • Synonyms
    FAM90A16P, FAM90A17P
  • Links
    NCBI Gene ID: 728746
    UniProt: P0DV74

  • Chr Location
    8p23.1; chr8:7746034-7749044 (+)  GRCh38
  • Human Ortholog
    FAM90A18, family with sequence similarity 90 member A18
  • Synonyms
    FAM90A18P, FAM90A19P
  • Links
    NCBI Gene ID: 441326
    UniProt: P0DV75

  • Chr Location
    8p23.1; chr8:7723091-7726101 (+)  GRCh38
  • Human Ortholog
    FAM90A19, family with sequence similarity 90 member A19
  • Synonyms
    FAM90A18P, FAM90A19P
  • Links
    NCBI Gene ID: 728753
    UniProt: P0DV76

  • Chr Location
    8p23.1; chr8:7753682-7756692 (+)  GRCh38
  • Human Ortholog
    FAM90A20, family with sequence similarity 90 member A20
  • Synonyms
    FAM90A20P
  • Links
    NCBI Gene ID: 728430
    UniProt: A6NIJ5

  • Chr Location
    8p23.1; chr8:7295014-7298024 (+)  GRCh38
  • Human Ortholog
    FAM90A22, family with sequence similarity 90 member A22
  • Synonyms
    FAM90A22P
  • Links
    NCBI Gene ID: 645558
    UniProt: A8MWA6

  • Chr Location
    8p23.1; chr8:7571995-7575006 (-)  GRCh38
  • Human Ortholog
    FAM90A23, family with sequence similarity 90 member A23
  • Synonyms
    FAM90A23P
  • Links
    NCBI Gene ID: 645572
    UniProt: A8MXZ1

  • Chr Location
    8p23.1; chr8:7579644-7582653 (-)  GRCh38
  • Human Ortholog
    FAM90A24, family with sequence similarity 90 member A24
  • Synonyms
    FAM90A24P
  • Links
    NCBI Gene ID: 441332
    UniProt: P0C7X0

  • Chr Location
    8p23.1; chr8:8019429-8024652 (-)  GRCh38
  • Human Ortholog
    FAM90A25P, Putative protein FAM90A2P
  • Synonyms
    FAM90A2P
  • Links
    NCBI Gene ID: 389633
    UniProt: Q658T7

  • Chr Location
    8p23.1; chr8:12414521-12418090 (-)  GRCh38
  • Human Ortholog
    FAM90A26, family with sequence similarity 90 member A26
  • Synonyms
    FAM90A26P
  • Links
    NCBI Gene ID: 100287045
    UniProt: D6RGX4

  • Chr Location
    chr4:9170409-9176730 (+)  GRCh38
  • Human Ortholog
    FAM90A27P, family with sequence similarity 90 member A27, pseudogene
  • Links
    NCBI Gene ID: 646508

  • Chr Location
    19q13.42; chr19:53277462-53284947 (+)  GRCh38
  • Human Ortholog
    FAM90A2P, family with sequence similarity 90 member A2, pseudogene
  • Links
    NCBI Gene ID: 729689

  • Chr Location
    8p23.1; chr8:12172761-12177267 (-)  GRCh38
  • Human Ortholog
    FAM90A5, family with sequence similarity 90 member A5
  • Synonyms
    FAM90A5P
  • Links
    NCBI Gene ID: 441315
    UniProt: A8MXJ8

  • Chr Location
    8p23.1; chr8:7287392-7290402 (+)  GRCh38
  • Human Ortholog
    FAM90A7, family with sequence similarity 90 member A7
  • Synonyms
    FAM90A7P
  • Links
    NCBI Gene ID: 441317
    UniProt: A6NKC0

  • Chr Location
    8p23.1; chr8:7556700-7559712 (-)  GRCh38
  • Human Ortholog
    FAM90A8, family with sequence similarity 90 member A8
  • Synonyms
    FAM90A8P
  • Links
    NCBI Gene ID: 441324
    UniProt: A6NJQ4

  • Chr Location
    8p23.1; chr8:7738387-7741396 (+)  GRCh38
  • Human Ortholog
    FAM90A9, family with sequence similarity 90 member A9
  • Synonyms
    FAM90A9P
  • Links
    NCBI Gene ID: 441327
    UniProt: A6NNJ1

  • Chr Location
    8p23.1; chr8:7761330-7764340 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
  • cDNA Data
    5
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 631145 NCBI Gene Model | MGI Sequence Detail 27005 C57BL/6J ±  kb
transcript NM_001362881 RefSeq | MGI Sequence Detail 1359 C57BL/6  
polypeptide A0A5F8MPE6 UniProt | EBI | MGI Sequence Detail 368 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:190524 Shalom-Barak T, et al., Placental PPARgamma regulates spatiotemporally diverse genes and a unique metabolic network. Dev Biol. 2012 Dec 1;372(1):143-55
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory