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Fam90a1b Gene Detail
Summary
  • Symbol
    Fam90a1b
  • Name
    family with sequence similarity 90, member A1B
  • Synonyms
    4932442L08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921682
    NCBI Gene: 631145
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:94355053-94366777 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 41.56 cM, cytoband C1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    12 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921682
protein coding gene ChrX:94339903-94366909 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035910
protein coding gene ChrX:90764553-90777860 (-)
A/J MGP_AJ_G0035896
protein coding gene ChrX:90857483-90869157 (-)
AKR/J MGP_AKRJ_G0035813
protein coding gene ChrX:93257684-93269410 (-)
BALB/cJ MGP_BALBcJ_G0035880
protein coding gene ChrX:89567608-89579246 (-)
C3H/HeJ MGP_C3HHeJ_G0035589
protein coding gene ChrX:91129844-91141581 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036409
protein coding gene ChrX:93531951-93544949 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033236
protein coding gene ChrX:89014389-89026153 (-)
CAST/EiJ MGP_CASTEiJ_G0034874
protein coding gene ChrX:75800041-75811828 (-)
CBA/J MGP_CBAJ_G0035563
protein coding gene ChrX:96231624-96245443 (-)
DBA/2J MGP_DBA2J_G0035719
protein coding gene ChrX:90081518-90093051 (-)
FVB/NJ MGP_FVBNJ_G0035658
protein coding gene ChrX:89496014-89507770 (-)
LP/J MGP_LPJ_G0035808
protein coding gene ChrX:91567428-91580721 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035692
protein coding gene ChrX:100543375-100555045 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036436
protein coding gene ChrX:90474119-90485815 (-)
PWK/PhJ MGP_PWKPhJ_G0034573
protein coding gene ChrX:73570345-73582323 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034403
protein coding gene ChrX:76643176-76654890 (-)
WSB/EiJ MGP_WSBEiJ_G0035015
protein coding gene ChrX:89270985-89284132 (-)



Homology
more
  • Human Ortholog
    CXorf58, chromosome X open reading frame 58
  • Vertebrate Orthologs
    5
  • Human Ortholog
    CXorf58, chromosome X open reading frame 58
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 254158
    neXtProt AC: NX_Q96LI9
    UniProt: Q96LI9

  • Chr Location
    Xp22.11; chrX:23907932-23939520 (+)  GRCh38.p7

  • Human Ortholog
    FAM90A1, family with sequence similarity 90 member A1
    Orthology source: HomoloGene
  • Links
    NCBI Gene ID: 55138
    neXtProt AC: NX_Q86YD7
    UniProt: Q86YD7

  • Chr Location
    12p13.31; chr12:8221260-8227618 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000043549 Ensembl Gene Model | MGI Sequence Detail 11725 C57BL/6J ±  kb
transcript ENSMUST00000044989 Ensembl | MGI Sequence Detail 2939 Not Applicable  
polypeptide ENSMUSP00000043958 Ensembl | MGI Sequence Detail 419 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:190524 Shalom-Barak T, et al., Placental PPARgamma regulates spatiotemporally diverse genes and a unique metabolic network. Dev Biol. 2012 Dec 1;372(1):143-55

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory