4932702P03Rik Gene Detail

Summary

• Symbol
  4932702P03Rik
• Name
  RIKEN cDNA 4932702P03 gene
• Synonyms
  1700047I16Rik

• Feature Type
  lncRNA gene
• IDs
  MGI:1921673
  NCBI Gene: 73326
• Alliance
  genome feature page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr13:25089583-25095763 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 10.76 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  244 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1921673	lncRNA gene	Chr13:25089560-25119021 (+)
129S1/SvImJ	ENSMUSG00200031632	lncRNA gene	Chr13:22220933-22229613 (+)
A/J	ENSMUSG00195040224	lncRNA gene	Chr13:21370204-21378886 (+)
AKR/J	ENSMUSG00220013147	lncRNA gene	Chr13:21191344-21200030 (+)
BALB/cJ	ENSMUSG00180022710	lncRNA gene	Chr13:21688662-21697348 (+)
C3H/HeJ	ENSMUSG00175033038	lncRNA gene	Chr13:21694928-21703614 (+)
C57BL/6NJ	ENSMUSG00215012954	lncRNA gene	Chr13:21850468-21859155 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002812	antisense lncRNA gene	Chr13:20709810-20718567 (+)
CAST/EiJ	ENSTCUG00005011421	lncRNA gene	Chr13:21868910-21877454 (+)
CBA/J	ENSMUSG00210026792	lncRNA gene	Chr13:21650051-21658738 (+)
DBA/2J	ENSMUSG00185021062	lncRNA gene	Chr13:22472040-22480721 (+)
FVB/NJ	ENSMUSG00205029297	lncRNA gene	Chr13:21490724-21499405 (+)
JF1/MsJ	ENSUMUG00000017118	lncRNA gene	Chr13:22145026-22153561 (+)
LP/J	ENSMUSG00230021905	lncRNA gene	Chr13:31799064-31807746 (+)
NOD/ShiLtJ	ENSMUSG00190037151	lncRNA gene	Chr13:21472600-21481133 (+)
NZO/HlLtJ	ENSMUSG00225046428	lncRNA gene	Chr13:25585155-25593692 (+)
PWK/PhJ	ENSLUMG00010030030	lncRNA gene	Chr13:21008009-21016524 (+)
SPRET/EiJ	ENSMSPG00010025794	lncRNA gene	Chr13:20834851-20843414 (+)
WSB/EiJ	ENSIUOG00005016580	lncRNA gene	Chr13:20997120-21005694 (+)

Homology

• Gene Tree
  4932702P03Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  8 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving 4932702P03Rik
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  36
• RefSeq
  1

• Ensembl
  ENSMUSG00000086796 (Evidence)
• NCBI Gene
  73326

Representative Sequences			Length	Strain/Species
genomic	73326	NCBI Gene Model | MGI Sequence Detail	6181	C57BL/6J
transcript	NR_045182	RefSeq | MGI Sequence Detail	690	C57BL/6

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 2

Other
Accession IDs

MGI:1920576

References

• Summaries
  All 18

  Phenotypes 8
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:141688 Goldsworthy M, et al., Role of the transcription factor sox4 in insulin secretion and impaired glucose tolerance. Diabetes. 2008 Aug;57(8):2234-44

TSS for 4932702P03Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr118975	Chr13:25089575-25089592 (+)	1 bp
Tssr118976	Chr13:25089599-25089616 (+)	25 bp
Tssr118977	Chr13:25089618-25089630 (+)	41 bp
Tssr118978	Chr13:25089639-25089644 (+)	59 bp