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Efhc2 Gene Detail
Summary
  • Symbol
    Efhc2
  • Name
    EF-hand domain (C-terminal) containing 2
  • Synonyms
    4933407D04Rik, mRib72-2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921655
    NCBI Gene: 74405
  • Gene Overview
    MyGene.info: EFHC2
Location & Maps
more
  • Sequence Map
    ChrX:17132049-17319368 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      187320 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 12.34 cM, cytoband A1.3
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    EFHC2, EF-hand domain containing 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    EFHC2, EF-hand domain containing 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    dJ1158H2.1, MRX74
  • Links
    NCBI Gene ID: 80258
    neXtProt AC: NX_Q5JST6
    UniProt: Q5JST6

  • Chr Location
    Xp11.3; chrX:44146254-44343677 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 11863
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: EFHC2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016939 VEGA Gene Model | MGI Sequence Detail 187320 C57BL/6J ±  kb
transcript OTTMUST00000041081 VEGA | MGI Sequence Detail 2554 Not Applicable  
polypeptide OTTMUSP00000018406 VEGA | MGI Sequence Detail 750 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    431 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/13/2017
MGI 6.10
The Jackson Laboratory