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Efhc2 Gene Detail
Summary
  • Symbol
    Efhc2
  • Name
    EF-hand domain (C-terminal) containing 2
  • Synonyms
    4933407D04Rik, mRib72-2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921655
    NCBI Gene: 74405
  • Gene Overview
    MyGene.info: EFHC2
Location & Maps
more
  • Sequence Map
    ChrX:17132049-17319368 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      187320 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 12.34 cM, cytoband A1.3
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    EFHC2, EF-hand domain containing 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    EFHC2, EF-hand domain containing 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    dJ1158H2.1, MRX74
  • Links
    NCBI Gene ID: 80258
    neXtProt AC: NX_Q5JST6

  • Chr Location
    Xp11.3; chrX:44146254-44343677 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 11863
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: EFHC2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
  • All Mutations and Alleles
    2
  • Targeted
    2
  • Incidental Mutations
    APF , CvDC
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016939 VEGA Gene Model | MGI Sequence Detail 187320 C57BL/6J ±  kb
transcript OTTMUST00000041081 VEGA | MGI Sequence Detail 2554 Not Applicable  
polypeptide OTTMUSP00000018406 VEGA | MGI Sequence Detail 750 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    431 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000030216 EF-hand domain-containing family member C2
  • InterPro Domains
    IPR011992 EF-hand domain pair
    IPR010554 Protein of unknown function DUF1126
    IPR006602 Uncharacterised domain DM10
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 3
References
more
  • Summaries
    All 24
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/13/2016
MGI 6.05
The Jackson Laboratory