4932438H23Rik Gene Detail

Summary

• Symbol
  4932438H23Rik
• Name
  RIKEN cDNA 4932438H23 gene

• Feature Type
  protein coding gene
• IDs
  MGI:1921637
  NCBI Gene: 74387
• Alliance
  gene page

Location & Maps

• Sequence Map
  Chr16:91053935-91095122 bp, - strand
• From VEGA annotation of GRCm38
  

  Mouse Genome Browser
  
  

• Download
  Sequence
    41188 bp   ±  kb flank
  
  
• Genome Browsers
  VEGA | Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 52.35 cM
• Mapping Data
  2 experiments

Homology

• Human Ortholog
  C21orf62, chromosome 21 open reading frame 62

• Vertebrate Orthologs
  9

• Human Ortholog
  C21orf62, chromosome 21 open reading frame 62
  Orthology source: HomoloGene, HGNC
• Synonyms
  B37, C21orf120, PRED81
• Links
  HGNC:1305

  NCBI Gene ID: 56245

  neXtProt AC: NX_Q9NYP8

  UniProt: Q9NYP8

  
  
• Chr Location
  21q22.11; chr21:32790673-32813808 (-)  GRCh38.p7

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• HomoloGene
  Vertebrate Homology Class 49594
  1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 frog, western clawed;1 macaque, rhesus
  
• HCOP
  human homology predictions: C21orf62
• Gene Tree
  4932438H23Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  12 phenotype references
  

• All Mutations and Alleles
  10
• Gene trapped
  1
• Targeted
  9
• Genomic Mutations
  6 involving 4932438H23Rik
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  6 strains or lines available

Gene Ontology
(GO)
Classifications

• External Resources
  FuncBase

Expression

• Assay Results
  232
• Tissues
  159
• cDNA Data
  5
• Literature Summary
  4

Images

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Interactions

• 4932438H23Rik interacts with 194 markers (Mir1a-1, Mir1a-2, Mir10b, ...) View All

Sequences &
Gene Models

• All Sequences
  34
• RefSeq
  12
• UniProt
  2
• CCDS
  CCDS28322.1

• VEGA
  OTTMUSG00000019968 (Evidence)
• Ensembl
  ENSMUSG00000039851 (Evidence)
• NCBI Gene
  74387

Representative Sequences			Length	Strain/Species
genomic	OTTMUSG00000019968	VEGA Gene Model | MGI Sequence Detail	41188	C57BL/6J
transcript	OTTMUST00000047585	VEGA | MGI Sequence Detail	2684	Not Applicable
polypeptide	OTTMUSP00000021548	VEGA | MGI Sequence Detail	230	Not Applicable

Polymorphisms

• SNPs within 2kb
  829 from dbSNP Build 142

Protein
Information

• UniProt
  2 Sequences
• InterPro Domains
  IPR029250 Protein of unknown function DUF4571

Molecular
Reagents

• All nucleic 9

  cDNA 6

  Primer pair 2

  Other 1

  
  

  Microarray probesets 3

Other
Accession IDs

MGI:2146457

References

• Summaries
  All 32

  Developmental Gene Expression 4

  Phenotypes 12
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:262380 Watson-Scales S, et al., Analysis of motor dysfunction in Down Syndrome reveals motor neuron degeneration. PLoS Genet. 2018 May;14(5):e1007383