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Gcc1 Gene Detail
Summary
  • Symbol
    Gcc1
  • Name
    golgi coiled coil 1
  • Synonyms
    4932417P04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921625
    NCBI Gene: 74375
  • Gene Overview
    MyGene.info: GCC1
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:28416603-28421724 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 11.99 cM, cytoband A3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    39 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921625
protein coding gene Chr6:28416091-28428390 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030507
protein coding gene Chr6:26143467-26155659 (-)
A/J MGP_AJ_G0030480
protein coding gene Chr6:25037866-25050169 (-)
AKR/J MGP_AKRJ_G0030407
protein coding gene Chr6:25862306-25878332 (-)
BALB/cJ MGP_BALBcJ_G0030490
protein coding gene Chr6:25202076-25214111 (-)
C3H/HeJ MGP_C3HHeJ_G0030203
protein coding gene Chr6:25850272-25862952 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030944
protein coding gene Chr6:26939252-26952855 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028155
protein coding gene Chr6:23268502-23280874 (-)
CAST/EiJ MGP_CASTEiJ_G0029605
protein coding gene Chr6:25658639-25671123 (-)
CBA/J MGP_CBAJ_G0030181
protein coding gene Chr6:27905873-27918098 (-)
DBA/2J MGP_DBA2J_G0030325
protein coding gene Chr6:24993531-25005847 (-)
FVB/NJ MGP_FVBNJ_G0030279
protein coding gene Chr6:24745121-24757732 (-)
LP/J MGP_LPJ_G0030412
protein coding gene Chr6:26277089-26289280 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030315
protein coding gene Chr6:30461268-30474902 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030974
protein coding gene Chr6:25744260-25757097 (-)
PWK/PhJ MGP_PWKPhJ_G0029319
protein coding gene Chr6:24520270-24534352 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029155
protein coding gene Chr6:25440437-25452702 (-)
WSB/EiJ MGP_WSBEiJ_G0029681
protein coding gene Chr6:25710552-25725234 (-)



Homology
more
  • Human Ortholog
    GCC1, GRIP and coiled-coil domain containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    GCC1, GRIP and coiled-coil domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GCC1P, GCC88
  • Links
    NCBI Gene ID: 79571
    neXtProt AC: NX_Q96CN9
    UniProt: Q96CN9

  • Chr Location
    7q32.1; chr7:127580628-127585600 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 74375 NCBI Gene Model | MGI Sequence Detail 5122 C57BL/6J ±  kb
transcript NM_028900 RefSeq | MGI Sequence Detail 4138 C57BL/6  
polypeptide Q9D4H2 UniProt | EBI | MGI Sequence Detail 778 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR000237 GRIP domain
Molecular
Reagents
less
  • All nucleic 27
    cDNA 27

    Microarray probesets 3
References
more
  • Summaries
    All 23
    Gene Ontology 4
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory