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Lonrf3 Gene Detail
Summary
  • Symbol
    Lonrf3
  • Name
    LON peptidase N-terminal domain and ring finger 3
  • Synonyms
    4932412G04Rik, 5730439E01Rik, A830039N02Rik, Rnf127
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921615
    NCBI Gene: 74365
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:36328353-36362341 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 20.72 cM, cytoband A2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    80 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921615
protein coding gene ChrX:36328353-36366857 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035618
protein coding gene ChrX:31234486-31274550 (+)
A/J MGP_AJ_G0035595
protein coding gene ChrX:31328574-31362613 (+)
AKR/J MGP_AKRJ_G0035528
protein coding gene ChrX:31987184-32022523 (+)
BALB/cJ MGP_BALBcJ_G0035588
protein coding gene ChrX:31063256-31097642 (+)
C3H/HeJ MGP_C3HHeJ_G0035306
protein coding gene ChrX:31560758-31594729 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036124
protein coding gene ChrX:31859466-31893499 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032986
protein coding gene ChrX:29467185-29503124 (+)
CAST/EiJ MGP_CASTEiJ_G0034597
protein coding gene ChrX:19710496-19746679 (+)
CBA/J MGP_CBAJ_G0035275
protein coding gene ChrX:32725412-32759296 (+)
DBA/2J MGP_DBA2J_G0035427
protein coding gene ChrX:31149405-31183300 (+)
FVB/NJ MGP_FVBNJ_G0035373
protein coding gene ChrX:30908154-30942302 (+)
LP/J MGP_LPJ_G0035509
protein coding gene ChrX:31596585-31631517 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035417
protein coding gene ChrX:33177525-33213380 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036131
protein coding gene ChrX:31215415-31250289 (+)
PWK/PhJ MGP_PWKPhJ_G0034298
protein coding gene ChrX:19208690-19245013 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034139
protein coding gene ChrX:20214981-20251302 (+)
WSB/EiJ MGP_WSBEiJ_G0034732
protein coding gene ChrX:31008483-31043548 (+)



Homology
more
  • Human Ortholog
    LONRF3, LON peptidase N-terminal domain and ring finger 3
  • Vertebrate Orthologs
    9
  • Human Ortholog
    LONRF3, LON peptidase N-terminal domain and ring finger 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    RNF127
  • Links
    NCBI Gene ID: 79836
    neXtProt AC: NX_Q496Y0
    UniProt: Q496Y0

  • Chr Location
    Xq24; chrX:118974614-119022925 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000016239 Ensembl Gene Model | MGI Sequence Detail 33989 C57BL/6J ±  kb
    transcript ENSMUST00000016383 Ensembl | MGI Sequence Detail 2911 Not Applicable  
    polypeptide ENSMUSP00000016383 Ensembl | MGI Sequence Detail 753 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 35
      cDNA 35

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:1917784, MGI:2147971
    References
    more
    • Summaries
      All 34
      Developmental Gene Expression 2
      Gene Ontology 1
      Phenotypes 6
    • Earliest
      J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
    • Latest
      J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.
    last database update
    08/13/2019
    MGI 6.14
    The Jackson Laboratory