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5730559C18Rik Gene Detail
Summary
  • Symbol
    5730559C18Rik
  • Name
    RIKEN cDNA 5730559C18 gene
  • Synonyms
    1700034M08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921579
    NCBI Gene: 67313
  • Gene Overview
    MyGene.info: C1orf106
Location & Maps
more
  • Sequence Map
    Chr1:136213531-136234264 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      20734 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 59.61 cM, cytoband F
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    C1orf106, chromosome 1 open reading frame 106
  • Vertebrate Orthologs
    7
  • Human Ortholog
    C1orf106, chromosome 1 open reading frame 106
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 55765
    neXtProt AC: NX_Q3KP66

  • Chr Location
    1q32.1; chr1:200891074-200915736 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    17
  • Chemically induced (other)
    2
  • Gene trapped
    11
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    3 involving 5730559C18Rik
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029725 VEGA Gene Model | MGI Sequence Detail 20734 C57BL/6J ±  kb
transcript OTTMUST00000073752 VEGA | MGI Sequence Detail 2988 Not Applicable  
polypeptide OTTMUSP00000038222 VEGA | MGI Sequence Detail 677 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    183 from dbSNP Build 142
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR021774 Protein of unknown function DUF3338
Molecular
Reagents
less
  • All nucleic 33
    cDNA 33

    Microarray probesets 4
Other
Accession IDs
less
MGI:1914563
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Phenotypes 12
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory