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1700086L19Rik Gene Detail
Summary
  • Symbol
    1700086L19Rik
  • Name
    RIKEN cDNA 1700086L19 gene
  • Synonyms
    1700006L05Rik
Location &
Maps
more
  • Sequence Map
    Chr12:74284276-74295950 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 32.45 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    64 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921534
protein coding gene Chr12:74284242-74295950 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005366
lincRNA gene Chr12:74247403-74258939 (+)
A/J MGP_AJ_G0005349
lincRNA gene Chr12:71471320-71483072 (+)
AKR/J MGP_AKRJ_G0005329
lincRNA gene Chr12:73615964-73628594 (+)
BALB/cJ MGP_BALBcJ_G0005331
lincRNA gene Chr12:71938445-71950421 (+)
C3H/HeJ MGP_C3HHeJ_G0005280
lincRNA gene Chr12:74075106-74087594 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005485
lincRNA gene Chr12:76531561-76543208 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004872
lincRNA gene Chr12:68881238-68892361 (+)
CAST/EiJ MGP_CASTEiJ_G0005227
lincRNA gene Chr12:68860713-68874282 (+)
CBA/J MGP_CBAJ_G0005269
lincRNA gene Chr12:79502432-79514511 (+)
DBA/2J MGP_DBA2J_G0005287
lincRNA gene Chr12:71336237-71348348 (+)
FVB/NJ MGP_FVBNJ_G0005312
lincRNA gene Chr12:70181949-70194745 (+)
LP/J MGP_LPJ_G0005368
lincRNA gene Chr12:74255295-74267316 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005294
lincRNA gene Chr12:82566538-82578869 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005487
lincRNA gene Chr12:73109012-73121300 (+)
PWK/PhJ MGP_PWKPhJ_G0005176
lincRNA gene Chr12:65673367-65685394 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005096
lincRNA gene Chr12:67550247-67565957 (+)
WSB/EiJ MGP_WSBEiJ_G0005275
lincRNA gene Chr12:73705144-73716698 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Sequences &
    Gene Models
    less
    • All Sequences
    • RefSeq
    • UniProt
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 74284 NCBI Gene Model | MGI Sequence Detail 11675 C57BL/6J ±  kb
    transcript NR_030733 RefSeq | MGI Sequence Detail 1063 C57BL/6  
    polypeptide P0C1Z5 UniProt | EBI | MGI Sequence Detail 52 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    • InterPro Domains
      IPR031665 UPF0730 family
    Molecular
    Reagents
    less
    • All nucleic 8
      cDNA 6
      Primer pair 1
      Other 1

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:1916530, MGI:2144940
    References
    more
    • Summaries
      All 25
      Developmental Gene Expression 2
      Phenotypes 7
    • Earliest
      J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
    • Latest
      J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    last database update
    12/03/2019
    MGI 6.14
    The Jackson Laboratory