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Chic2
Gene Detail
Symbol

Name
ID
Chic2
cysteine-rich hydrophobic domain 2
MGI:1921527
Synonyms
1700081B18Rik, 4930502K01Rik, BTL
Feature Type
protein coding gene
Genetic Map
Chromosome 5
39.54 cM, cytoband D
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:75001026-75044774 bp, - strand
From VEGA annotation of GRCm38

  43749 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8105  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: CHIC2
Gene Tree: Chic2

Human
homologs
CHIC2, cysteine-rich hydrophobic domain 2
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 26511
neXtProt AC: NX_Q9UKJ5

Human Synonyms: BTL

Human Chr (Location): 4q11; chr4:54008373-54065427 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(17) : Gene trapped(13) Radiation induced(1) Targeted(3)
Genomic Mutations involving Chic2 (1)
Incidental mutations (data from APF )
Phenotype Images(4)
Interactions
Chic2 interacts with 424 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process Golgi to plasma membrane transport
Component cell, Golgi apparatus, ...
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(77)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase chic2 ; ZFIN chic2    NEW 
Molecular
reagents
All nucleic(77) cDNA(77)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000031089 (Evidence)
Ensembl Gene Model ENSMUSG00000029229 (Evidence)
Entrez Gene 74277 (Evidence)
UniGene 239814
DFCI TC1579698, TC1622521, TC1645509
DoTS DT.493973, DT.101372276
NIA Mouse Gene Index U026309
Consensus CDS Project CCDS19349.1
International Mouse Phenotyping Consortium Status Chic2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000031089 VEGA Gene Model | MGI Sequence Detail 43749 C57BL/6J ±  kb
transcript OTTMUST00000077019 VEGA | MGI Sequence Detail 6661 Not Applicable 
polypeptide OTTMUSP00000040617 VEGA | MGI Sequence Detail 165 Not Applicable 

For the selected sequences
All sequences(29) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(155 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR019383 Golgin subfamily A member 7/ERF4
Protein Ontology PR:000031951 cysteine-rich hydrophobic domain 2 protein
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(32)
Other
accession IDs
MGI:1922202

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
05/20/2015
MGI 5.22
The Jackson Laboratory