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Chic2 Gene Detail
Summary
  • Symbol
    Chic2
  • Name
    cysteine-rich hydrophobic domain 2
  • Synonyms
    1700081B18Rik, 4930502K01Rik, BTL
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921527
    NCBI Gene: 74277
Location & Maps
more
  • Sequence Map
    Chr5:74997988-75044774 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      46787 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    CHIC2, cysteine rich hydrophobic domain 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CHIC2, cysteine rich hydrophobic domain 2
    Orthology source: HGNC, HomoloGene
  • Synonyms
    BTL
  • Links
    NCBI Gene ID: 26511
    neXtProt AC: NX_Q9UKJ5

  • Chr Location
    4q11; chr4:54008373-54065427 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 8105
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: CHIC2
  • Gene Tree
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    225 phenotype references
  • All Mutations and Alleles
    23
  • Chemically induced (other)
    2
  • Gene trapped
    13
  • Radiation induced
    1
  • Spontaneous
    3
  • Targeted
    4
  • Genomic Mutations
    6 involving Chic2
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000031089 VEGA Gene Model | MGI Sequence Detail 46787 C57BL/6J ±  kb
transcript OTTMUST00000077019 VEGA | MGI Sequence Detail 9699 Not Applicable  
polypeptide OTTMUSP00000040617 VEGA | MGI Sequence Detail 165 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    174 from dbSNP Build 137
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000031951 cysteine-rich hydrophobic domain 2 protein
  • InterPro Domains
    IPR019383 Golgin subfamily A member 7/ERF4
Molecular
Reagents
less
  • All nucleic 77
    cDNA 77

    Microarray probesets 5
Other
Accession IDs
less
MGI:1922202
References
more
  • Summaries
    All 30
    Diseases 1
    Gene Ontology 2
    Phenotypes 225
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
01/26/2016
MGI 6.02
The Jackson Laboratory