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1700039M15Rik Gene Detail
Summary
  • Symbol
    1700039M15Rik
  • Name
    RIKEN cDNA 1700039M15 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1921516
    NCBI Gene: 74266
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr9:107241220-107243997 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921516
lncRNA gene Chr9:107241220-107243997 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007503
lincRNA gene Chr9:109097081-109099867 (+)
A/J MGP_AJ_G0007498
lincRNA gene Chr9:105134080-105136866 (+)
AKR/J MGP_AKRJ_G0007470
lincRNA gene Chr9:107751894-107754680 (+)
BALB/cJ MGP_BALBcJ_G0007475
lincRNA gene Chr9:104804631-104807417 (+)
C3H/HeJ MGP_C3HHeJ_G0007420
lincRNA gene Chr9:108154025-108156811 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007647
lincRNA gene Chr9:112092653-112095430 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006828
lincRNA gene Chr9:102565779-102568502 (+)
CAST/EiJ MGP_CASTEiJ_G0007323
lincRNA gene Chr9:108082106-108084863 (+)
CBA/J MGP_CBAJ_G0007401
lincRNA gene Chr9:116069847-116072624 (+)
DBA/2J MGP_DBA2J_G0007427
lincRNA gene Chr9:104588540-104591317 (+)
FVB/NJ MGP_FVBNJ_G0007443
lincRNA gene Chr9:103348405-103351191 (+)
LP/J MGP_LPJ_G0007507
lincRNA gene Chr9:109303827-109306613 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007424
lincRNA gene Chr9:117655536-117658322 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007652
lincRNA gene Chr9:108020702-108023488 (+)
PWK/PhJ MGP_PWKPhJ_G0007264
lincRNA gene Chr9:104900900-104903677 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007168
lincRNA gene Chr9:108080579-108083334 (+)
WSB/EiJ MGP_WSBEiJ_G0007383
lincRNA gene Chr9:107907112-107909937 (+)



Homology
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000104086 Ensembl Gene Model | MGI Sequence Detail 2778 C57BL/6J ±  kb
transcript ENSMUST00000195377 Ensembl | MGI Sequence Detail 1120 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory