Lrrc2
Gene Detail

Symbol Name ID

Lrrc2 leucine rich repeat containing 2 MGI:1921499

Synonyms

2400002D05Rik, 4933431K03Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 9

60.79 cM, cytoband F2
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr9:110951545-110984066 bp, + strand From NCBI annotation of GRCm38   32522 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:23454  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Lrrc2

Human homologs

Human Homolog		LRRC2, leucine rich repeat containing 2
NCBI Gene ID		79442
neXtProt AC		NX_Q9BYS8
Human Chr (Location)		3p21.31; chr3:46556876-46608040 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(225) : Targeted(1) Gene trapped(224)

Gene Ontology (GO) classifications

All GO classifications: (3 annotations)

Process	biological_process
Component	cellular_component
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (72)    Tissues (2)   
Theiler Stages: 2, 3

Assay Type	Results
RT-PCR	72

cDNA source data(17)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(20) cDNA(17) Primer pair(2) Other(1)
Microarray probesets(5)

Other database links

Ensembl Gene Model	ENSMUSG00000032495 (Evidence)
Entrez Gene	74249 (Evidence)
UniGene	307615
DFCI	TC1584090
DoTS	DT.50315296
NIA Mouse Gene Index	U011076
Consensus CDS Project	CCDS23580.1
International Mouse Knockout Project Status	Lrrc2

Sequences

Length	Strain/Species
genomic	74249	NCBI Gene Model | MGI Sequence Detail	32522	C57BL/6J
transcript	NM_028838	RefSeq | MGI Sequence Detail	3657	C57BL/6
polypeptide	Q8VDB8	UniProt | EBI | MGI Sequence Detail	371	Not Applicable

All sequences(17) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(90 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR001611	Leucine-rich repeat
InterPro	IPR025875	Leucine rich repeat 4
InterPro	IPR003591	Leucine-rich repeat, typical subtype
Protein Ontology	PR:000030545	leucine-rich repeat-containing protein 2

Graphical View of Protein Domain Structure

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:174767 Tang F, et al., Deterministic and stochastic allele specific gene expression in single mouse blastomeres. PLoS One. 2011;6(6):e21208
All references(34)

Other accession IDs

MGI:1922983