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1700016K19Rik Gene Detail
Summary
  • Symbol
    1700016K19Rik
  • Name
    RIKEN cDNA 1700016K19 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921480
    NCBI Gene: 74230
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:75999912-76003569 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 45.92 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    47 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921480
protein coding gene Chr11:75999912-76003569 (.)
129S1/SvImJ MGP_129S1SvImJ_G0018725
protein coding gene Chr11:76794880-76798537 (+)
A/J MGP_AJ_G0018691
protein coding gene Chr11:73927377-73931034 (+)
AKR/J MGP_AKRJ_G0018661
protein coding gene Chr11:76165901-76169558 (+)
BALB/cJ MGP_BALBcJ_G0018665
protein coding gene Chr11:74306886-74310543 (+)
C3H/HeJ MGP_C3HHeJ_G0018478
protein coding gene Chr11:76185161-76188820 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019116
protein coding gene Chr11:79209538-79213195 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016751
protein coding gene Chr11:70941839-70945557 (+)
CAST/EiJ MGP_CASTEiJ_G0018032
protein coding gene Chr11:76582137-76585839 (+)
CBA/J MGP_CBAJ_G0018448
protein coding gene Chr11:82677122-82680779 (+)
DBA/2J MGP_DBA2J_G0018557
protein coding gene Chr11:73526208-73529865 (+)
FVB/NJ MGP_FVBNJ_G0018547
protein coding gene Chr11:73089380-73093037 (+)
LP/J MGP_LPJ_G0018628
protein coding gene Chr11:77369109-77372766 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018573
protein coding gene Chr11:83188372-83192037 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019156
protein coding gene Chr11:76376962-76380619 (+)
PWK/PhJ MGP_PWKPhJ_G0017803
protein coding gene Chr11:74245753-74249419 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017594
protein coding gene Chr11:75944337-75948020 (+)
WSB/EiJ MGP_WSBEiJ_G0018085
protein coding gene Chr11:76194326-76197977 (+)



Homology
more
  • Human Ortholog
    C17orf97, chromosome 17 open reading frame 97
  • Vertebrate Orthologs
    7
  • Human Ortholog
    C17orf97, chromosome 17 open reading frame 97
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CK20, LIAT1
  • Links
    NCBI Gene ID: 400566
    neXtProt AC: NX_Q6ZQX7
    UniProt: Q6ZQX7

  • Chr Location
    17p13.3; chr17:410327-414666 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 74230 NCBI Gene Model | MGI Sequence Detail 3658 C57BL/6J ±  kb
transcript NM_198637 RefSeq | MGI Sequence Detail 941 Not Specified  
polypeptide Q810M6 UniProt | EBI | MGI Sequence Detail 228 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR038794 Protein LIAT1
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 4
References
more
  • Summaries
    All 34
    Gene Ontology 3
    Phenotypes 14
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:216283 Brower CS, et al., Liat1, an arginyltransferase-binding protein whose evolution among primates involved changes in the numbers of its 10-residue repeats. Proc Natl Acad Sci U S A. 2014 Nov 18;111(46):E4936-45

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory