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1700017B05Rik Gene Detail
Summary
  • Symbol
    1700017B05Rik
  • Name
    RIKEN cDNA 1700017B05 gene
  • Synonyms
    D9Ertd278e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921461
    NCBI Gene: 74211
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:57253117-57262612 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 30.89 cM, cytoband C
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921461
protein coding gene Chr9:57252322-57262612 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034863
protein coding gene Chr9:56437289-56447613 (-)
A/J MGP_AJ_G0034844
protein coding gene Chr9:54622548-54632913 (-)
AKR/J MGP_AKRJ_G0034773
protein coding gene Chr9:55889332-55899646 (-)
BALB/cJ MGP_BALBcJ_G0034836
protein coding gene Chr9:54413994-54424271 (-)
C3H/HeJ MGP_C3HHeJ_G0034546
protein coding gene Chr9:56360113-56374519 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035355
protein coding gene Chr9:58028893-58039206 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032266
protein coding gene Chr9:53948584-53958800 (-)
CAST/EiJ MGP_CASTEiJ_G0033867
protein coding gene Chr9:56439701-56449969 (-)
CBA/J MGP_CBAJ_G0034517
protein coding gene Chr9:60059825-60070092 (-)
DBA/2J MGP_DBA2J_G0034676
protein coding gene Chr9:54501702-54512479 (-)
FVB/NJ MGP_FVBNJ_G0034618
protein coding gene Chr9:53720988-53731321 (-)
LP/J MGP_LPJ_G0034759
protein coding gene Chr9:56733098-56743415 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034661
protein coding gene Chr9:61526840-61537141 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035377
protein coding gene Chr9:55908112-55918415 (-)
PWK/PhJ MGP_PWKPhJ_G0033572
protein coding gene Chr9:54524827-54535269 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033406
protein coding gene Chr9:56188728-56199023 (-)
WSB/EiJ MGP_WSBEiJ_G0033980
protein coding gene Chr9:55837342-55847655 (-)



Homology
more
  • Human Ortholog
    C15orf39, chromosome 15 open reading frame 39
  • Vertebrate Orthologs
    7
  • Human Ortholog
    C15orf39, chromosome 15 open reading frame 39
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 56905
    neXtProt AC: NX_Q6ZRI6
    UniProt: Q6ZRI6

  • Chr Location
    15q24.2; chr15:75201880-75212169 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000032300 Ensembl Gene Model | MGI Sequence Detail 9496 C57BL/6J ±  kb
transcript ENSMUST00000034846 Ensembl | MGI Sequence Detail 4152 Not Applicable  
polypeptide ENSMUSP00000034846 Ensembl | MGI Sequence Detail 1023 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR037656 Uncharacterised protein C15orf39
Molecular
Reagents
less
  • All nucleic 84
    cDNA 83
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1196263, MGI:2142962
References
more
  • Summaries
    All 31
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory