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Ccdc3 Gene Detail
Summary
  • Symbol
    Ccdc3
  • Name
    coiled-coil domain containing 3
  • Synonyms
    2310045O21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921436
    NCBI Gene: 74186
  • Gene Overview
    MyGene.info: CCDC3
Location & Maps
more
  • Genetic Map
    Chromosome 2, 3.25 cM, cytoband A1
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CCDC3, coiled-coil domain containing 3
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CCDC3, coiled-coil domain containing 3
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 83643
    neXtProt AC: NX_Q9BQI4

  • Chr Location
    10p13; chr10:12896625-13099773 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 12870
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: CCDC3
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    13 phenotypes from 1 allele in 1 genetic background
    2 images
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010865 VEGA Gene Model | MGI Sequence Detail 93103 C57BL/6J ±  kb
transcript OTTMUST00000025427 VEGA | MGI Sequence Detail 2670 Not Applicable  
polypeptide OTTMUSP00000011651 VEGA | MGI Sequence Detail 273 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    361 from dbSNP Build 142
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000032536 coiled-coil domain-containing protein 3
Molecular
Reagents
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  • All nucleic 20
    cDNA 20

    Microarray probesets 3
References
more
  • Summaries
    All 27
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:220560 Kobayashi S, et al., Fat/Vessel-derived Secretory Protein (Favine)/CCDC3 Is Involved in Lipid Accumulation. J Biol Chem. 2015 Mar 20;290(12):7443-51

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory