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Crct1 Gene Detail
Summary
  • Symbol
    Crct1
  • Name
    cysteine-rich C-terminal 1
  • Synonyms
    2300002G24Rik, Nice-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921425
    NCBI Gene: 74175
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:93014205-93015686 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 40.14 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921425
protein coding gene Chr3:93014205-93015687 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027528
protein coding gene Chr3:93491785-93493267 (-)
A/J MGP_AJ_G0027492
protein coding gene Chr3:90573686-90575168 (-)
AKR/J MGP_AKRJ_G0027460
protein coding gene Chr3:92673810-92675292 (-)
BALB/cJ MGP_BALBcJ_G0027501
protein coding gene Chr3:90357575-90359057 (-)
C3H/HeJ MGP_C3HHeJ_G0027240
protein coding gene Chr3:92888329-92889811 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027944
protein coding gene Chr3:97051567-97053049 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025293
protein coding gene Chr3:87178823-87180335 (-)
CAST/EiJ MGP_CASTEiJ_G0026688
protein coding gene Chr3:92319659-92321141 (-)
CBA/J MGP_CBAJ_G0027215
protein coding gene Chr3:100388163-100389645 (-)
DBA/2J MGP_DBA2J_G0027353
protein coding gene Chr3:89892785-89894267 (-)
FVB/NJ MGP_FVBNJ_G0027322
protein coding gene Chr3:88030132-88031614 (-)
LP/J MGP_LPJ_G0027462
protein coding gene Chr3:94725076-94726558 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027346
protein coding gene Chr3:106677227-106678709 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028003
protein coding gene Chr3:92416024-92417506 (-)
PWK/PhJ MGP_PWKPhJ_G0026416
protein coding gene Chr3:89764603-89766085 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026236
protein coding gene Chr3:90757219-90758700 (-)
WSB/EiJ MGP_WSBEiJ_G0026770
protein coding gene Chr3:92789904-92791386 (-)



Homology
more
  • Human Ortholog
    CRCT1, cysteine rich C-terminal 1
  • Human Ortholog
    CRCT1, cysteine rich C-terminal 1
    Orthology source: HGNC
  • Synonyms
    C1orf42, NICE1, NICE-1
  • Links
    NCBI Gene ID: 54544
    neXtProt AC: NX_Q9UGL9
    UniProt: Q9UGL9

  • Chr Location
    1q21.3; chr1:152514502-152516010 (+)  GRCh38.p7

  • HCOP
    human homology predictions: CRCT1
  • Gene Tree
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    2 involving Crct1
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 74175 NCBI Gene Model | MGI Sequence Detail 1482 C57BL/6J ±  kb
transcript NM_028798 RefSeq | MGI Sequence Detail 717 C57BL/6  
polypeptide NP_083074 RefSeq | MGI Sequence Detail 102 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR031698 Cysteine-rich C-terminal protein 1
Molecular
Reagents
less
  • All nucleic 30
    cDNA 30

    Microarray probesets 4
Other
Accession IDs
less
MGI:2139602
References
more
  • Summaries
    All 30
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:193188 Sekeres MJ, et al., Increasing CRTC1 function in the dentate gyrus during memory formation or reactivation increases memory strength without compromising memory quality. J Neurosci. 2012 Dec 5;32(49):17857-68

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory