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Acbd5 Gene Detail
Summary
  • Symbol
    Acbd5
  • Name
    acyl-Coenzyme A binding domain containing 5
  • Synonyms
    1300014E15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921409
    NCBI Gene: 74159
  • Alliance
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:23067689-23114513 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 15.21 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    78 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921409
protein coding gene Chr2:23067689-23115558 (.)
129S1/SvImJ MGP_129S1SvImJ_G0025395
protein coding gene Chr2:20814527-20859894 (+)
A/J MGP_AJ_G0025373
protein coding gene Chr2:19972151-20017425 (+)
AKR/J MGP_AKRJ_G0025342
protein coding gene Chr2:20682233-20728924 (+)
BALB/cJ MGP_BALBcJ_G0025368
protein coding gene Chr2:20076976-20123222 (+)
C3H/HeJ MGP_C3HHeJ_G0025129
protein coding gene Chr2:20602565-20645305 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025812
protein coding gene Chr2:21408495-21451419 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023226
protein coding gene Chr2:19052226-19101123 (+)
CAST/EiJ MGP_CASTEiJ_G0024592
protein coding gene Chr2:20517598-20561596 (+)
CBA/J MGP_CBAJ_G0025107
protein coding gene Chr2:22228792-22283245 (+)
DBA/2J MGP_DBA2J_G0025240
protein coding gene Chr2:19859145-19906264 (+)
FVB/NJ MGP_FVBNJ_G0025202
protein coding gene Chr2:19643662-19688173 (+)
LP/J MGP_LPJ_G0025326
protein coding gene Chr2:20739753-20785250 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025233
protein coding gene Chr2:22292470-22342569 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025871
protein coding gene Chr2:20576510-20613961 (+)
PWK/PhJ MGP_PWKPhJ_G0024341
protein coding gene Chr2:19690227-19737876 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024141
protein coding gene Chr2:20681580-20732840 (+)
WSB/EiJ MGP_WSBEiJ_G0024662
protein coding gene Chr2:20711118-20756517 (+)



Homology
more
  • Human Ortholog
    ACBD5, acyl-CoA binding domain containing 5
  • Vertebrate Orthologs
    12
  • Human Ortholog
    ACBD5, acyl-CoA binding domain containing 5
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 91452
    neXtProt AC: NX_Q5T8D3
    UniProt: Q5T8D3

  • Chr Location
    10p12.1; chr10:27182624-27248674 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 74159 NCBI Gene Model | MGI Sequence Detail 46825 C57BL/6J ±  kb
transcript NM_001355637 RefSeq | MGI Sequence Detail 3757 C57BL/6  
polypeptide Q5XG73 UniProt | EBI | MGI Sequence Detail 508 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    8 Sequences
  • InterPro Domains
    IPR016347 Acyl-CoA-binding domain-containing protein 5
    IPR000582 Acyl-CoA-binding protein, ACBP
    IPR022408 Acyl-CoA-binding protein, ACBP, conserved site
    IPR035984 Acyl-CoA binding protein superfamily
    IPR014352 FERM/acyl-CoA-binding protein superfamily
Molecular
Reagents
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  • All nucleic 10
    cDNA 9
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 31
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:246912 Ye A, et al., PEG3 control on the mammalian MSL complex. PLoS One. 2017;12(6):e0178363

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/11/2018
MGI 6.13
The Jackson Laboratory