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Cmtr1 Gene Detail
Summary
  • Symbol
    Cmtr1
  • Name
    cap methyltransferase 1
  • Synonyms
    1300018I05Rik, Ftsjd2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921407
    NCBI Gene: 74157
Location & Maps
more
  • Sequence Map
    Chr17:29660595-29705979 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      45385 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 15.43 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CMTR1, cap methyltransferase 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CMTR1, cap methyltransferase 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    FTSJD2, hMTr1, KIAA0082, MTr1
  • Links
    NCBI Gene ID: 23070
    neXtProt AC: NX_Q8N1G2

  • Chr Location
    6p21.2; chr6:37433131-37482827 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033063 VEGA Gene Model | MGI Sequence Detail 45385 C57BL/6J ±  kb
transcript OTTMUST00000082571 VEGA | MGI Sequence Detail 6380 Not Applicable  
polypeptide OTTMUSP00000044268 VEGA | MGI Sequence Detail 837 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    256 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 25
    cDNA 24
    Primer pair 1

    Microarray probesets 6
Other
Accession IDs
less
MGI:2146866
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory