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Slc35f5 Gene Detail
Summary
  • Symbol
    Slc35f5
  • Name
    solute carrier family 35, member F5
  • Synonyms
    1300003P13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921400
    NCBI Gene: 74150
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:125560595-125595820 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 54.70 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    334 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921400
protein coding gene Chr1:125560411-125595823 (+)
129S1/SvImJ MGP_129S1SvImJ_G0016415
protein coding gene Chr1:128655748-128692204 (+)
A/J MGP_AJ_G0016398
protein coding gene Chr1:123920453-123956211 (+)
AKR/J MGP_AKRJ_G0016363
protein coding gene Chr1:127545386-127580990 (+)
BALB/cJ MGP_BALBcJ_G0016358
protein coding gene Chr1:124270205-124307517 (+)
C3H/HeJ MGP_C3HHeJ_G0016184
protein coding gene Chr1:127743223-127781044 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016819
protein coding gene Chr1:133516329-133553381 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014532
protein coding gene Chr1:117323489-117358812 (+)
CAST/EiJ MGP_CASTEiJ_G0015765
protein coding gene Chr1:126648252-126684639 (+)
CBA/J MGP_CBAJ_G0016157
protein coding gene Chr1:138033125-138068207 (+)
DBA/2J MGP_DBA2J_G0016263
protein coding gene Chr1:122925737-122961653 (+)
FVB/NJ MGP_FVBNJ_G0016262
protein coding gene Chr1:121666220-121702077 (+)
LP/J MGP_LPJ_G0016334
protein coding gene Chr1:130000425-130035430 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016287
protein coding gene Chr1:143969341-144007401 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016855
protein coding gene Chr1:127319734-127356474 (+)
PWK/PhJ MGP_PWKPhJ_G0015551
protein coding gene Chr1:121898048-121934376 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015339
protein coding gene Chr1:126250228-126285646 (+)
WSB/EiJ MGP_WSBEiJ_G0015827
protein coding gene Chr1:127262303-127303705 (+)



Homology
more
  • Human Ortholog
    SLC35F5, solute carrier family 35 member F5
  • Vertebrate Orthologs
    8
  • Human Ortholog
    SLC35F5, solute carrier family 35 member F5
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 80255
    neXtProt AC: NX_Q8WV83
    UniProt: Q8WV83

  • Chr Location
    2q14.1; chr2:113702677-113756823 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000026342 Ensembl Gene Model | MGI Sequence Detail 35226 C57BL/6J ±  kb
transcript ENSMUST00000027580 Ensembl | MGI Sequence Detail 2733 Not Applicable  
polypeptide ENSMUSP00000027580 Ensembl | MGI Sequence Detail 524 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 57
    cDNA 56
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2138308
References
more
  • Summaries
    All 34
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory