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Dcaf6 Gene Detail
Summary
  • Symbol
    Dcaf6
  • Name
    DDB1 and CUL4 associated factor 6
  • Synonyms
    1200006M05Rik, Iqwd1, PC326
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921356
    NCBI Gene: 74106
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:165329500-165460553 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 72.67 cM, cytoband H2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    704 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921356
protein coding gene Chr1:165328698-165460553 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016692
protein coding gene Chr1:170810762-170946974 (-)
A/J MGP_AJ_G0016673
protein coding gene Chr1:163843027-163970458 (-)
AKR/J MGP_AKRJ_G0016639
protein coding gene Chr1:168803901-168932120 (-)
BALB/cJ MGP_BALBcJ_G0016634
protein coding gene Chr1:164334175-164465944 (-)
C3H/HeJ MGP_C3HHeJ_G0016458
protein coding gene Chr1:169020589-169151892 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017095
protein coding gene Chr1:176541843-176680154 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014804
protein coding gene Chr1:155751553-155869878 (-)
CAST/EiJ MGP_CASTEiJ_G0016038
protein coding gene Chr1:168648625-168769504 (-)
CBA/J MGP_CBAJ_G0016433
protein coding gene Chr1:182825938-182955269 (-)
DBA/2J MGP_DBA2J_G0016539
protein coding gene Chr1:162735056-162854857 (-)
FVB/NJ MGP_FVBNJ_G0016537
protein coding gene Chr1:161177147-161294633 (-)
LP/J MGP_LPJ_G0016610
protein coding gene Chr1:171873152-172004455 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016562
protein coding gene Chr1:190317121-190458236 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017131
protein coding gene Chr1:168658540-168792435 (-)
PWK/PhJ MGP_PWKPhJ_G0015824
protein coding gene Chr1:161934529-162060136 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015611
protein coding gene Chr1:167525722-167636815 (-)
WSB/EiJ MGP_WSBEiJ_G0016100
protein coding gene Chr1:168818399-168947389 (-)



Homology
more
  • Human Ortholog
    DCAF6, DDB1 and CUL4 associated factor 6
  • Vertebrate Orthologs
    10
  • Human Ortholog
    DCAF6, DDB1 and CUL4 associated factor 6
    Orthology source: HGNC, HomoloGene
  • Synonyms
    1200006M05Rik, ARCAP, IQWD1, MSTP055, NRIP, PC326
  • Links
    NCBI Gene ID: 55827
    neXtProt AC: NX_Q58WW2
    UniProt: Q58WW2

  • Chr Location
    1q24.2; chr1:167936247-168075843 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 74106 NCBI Gene Model | MGI Sequence Detail 131054 C57BL/6J ±  kb
transcript NM_028759 RefSeq | MGI Sequence Detail 3306 C57BL/6  
polypeptide Q9DC22 UniProt | EBI | MGI Sequence Detail 876 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 25
    Genomic 2
    cDNA 23

    Microarray probesets 2
References
more
  • Summaries
    All 30
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/11/2018
MGI 6.13
The Jackson Laboratory