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4933405D12Rik Gene Detail
Summary
  • Symbol
    4933405D12Rik
  • Name
    RIKEN cDNA 4933405D12 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1921307
    NCBI Gene: 74057
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:122882592-122924116 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 53.73 cM, cytoband G3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    336 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921307
lncRNA gene Chr3:122864737-122924116 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003828
antisense lncRNA gene Chr3:125154477-125220249 (-)
A/J MGP_AJ_G0003808
antisense lncRNA gene Chr3:120964952-121028360 (-)
AKR/J MGP_AKRJ_G0003784
antisense lncRNA gene Chr3:124049421-124120344 (-)
BALB/cJ MGP_BALBcJ_G0003795
antisense lncRNA gene Chr3:120780324-120840763 (-)
C3H/HeJ MGP_C3HHeJ_G0003742
antisense lncRNA gene Chr3:124449830-124513155 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003937
antisense lncRNA gene Chr3:129693319-129757996 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003440
antisense lncRNA gene Chr3:116390221-116451557 (-)
CAST/EiJ MGP_CASTEiJ_G0003706
antisense lncRNA gene Chr3:123845903-123908085 (-)
CBA/J MGP_CBAJ_G0003736
antisense lncRNA gene Chr3:134073023-134148871 (-)
DBA/2J MGP_DBA2J_G0003748
antisense lncRNA gene Chr3:120089578-120152990 (-)
FVB/NJ MGP_FVBNJ_G0003769
antisense lncRNA gene Chr3:117707129-117769532 (-)
LP/J MGP_LPJ_G0003830
antisense lncRNA gene Chr3:126670966-126732933 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003756
antisense lncRNA gene Chr3:141625353-141693428 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003938
antisense lncRNA gene Chr3:123613459-123671374 (-)
PWK/PhJ MGP_PWKPhJ_G0003662
antisense lncRNA gene Chr3:119814481-119883421 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003606
antisense lncRNA gene Chr3:121709544-121772894 (-)
WSB/EiJ MGP_WSBEiJ_G0003742
antisense lncRNA gene Chr3:124344265-124413992 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (other)
    1
  • Gene trapped
    5
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 4933405D12Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 74057 NCBI Gene Model | MGI Sequence Detail 41525 C57BL/6J ±  kb
transcript NR_046036 RefSeq | MGI Sequence Detail 768 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Diseases 1
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/07/2020
MGI 6.14
The Jackson Laboratory