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4931406B18Rik Gene Detail
Summary
  • Symbol
    4931406B18Rik
  • Name
    RIKEN cDNA 4931406B18 gene
  • Synonyms
    4930538L19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921304
    NCBI Gene: 74054
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:43141468-43155364 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 28.25 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    176 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921304
protein coding gene Chr7:43141468-43155393 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032129
protein coding gene Chr7:43506627-43522352 (-)
A/J MGP_AJ_G0032114
protein coding gene Chr7:42619023-42632893 (-)
AKR/J MGP_AKRJ_G0032044
protein coding gene Chr7:43990801-44004519 (-)
BALB/cJ MGP_BALBcJ_G0032119
protein coding gene Chr7:42734029-42747932 (-)
C3H/HeJ MGP_C3HHeJ_G0031835
protein coding gene Chr7:44489323-44503186 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032603
protein coding gene Chr7:45701154-45714920 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029626
protein coding gene Chr7:44739888-44754302 (-)
CAST/EiJ MGP_CASTEiJ_G0031165
protein coding gene Chr7:35664139-35677981 (-)
CBA/J MGP_CBAJ_G0031804
protein coding gene Chr7:47151208-47166980 (-)
DBA/2J MGP_DBA2J_G0031953
protein coding gene Chr7:42419241-42433910 (-)
FVB/NJ MGP_FVBNJ_G0031914
protein coding gene Chr7:42138803-42152561 (-)
LP/J MGP_LPJ_G0032032
protein coding gene Chr7:44245552-44259464 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031950
protein coding gene Chr7:46100950-46115139 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032623
protein coding gene Chr7:43118379-43131999 (-)
PWK/PhJ MGP_PWKPhJ_G0030886
protein coding gene Chr7:35864518-35878956 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030725
protein coding gene Chr7:31167357-31181111 (-)
WSB/EiJ MGP_WSBEiJ_G0031279
protein coding gene Chr7:43663228-43677168 (-)



Homology
more
  • Human Ortholog
    SIGLEC1, sialic acid binding Ig like lectin 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SIGLEC1, sialic acid binding Ig like lectin 1
  • Synonyms
    CD169, SIGLEC-1, SN
  • Links
    NCBI Gene ID: 6614
    neXtProt AC: NX_Q9BZZ2
    UniProt: Q9BZZ2

  • Chr Location
    20p13; chr20:3686970-3712558 (-)  GRCh38.p7

  • Human Ortholog
    SIGLECL1, SIGLEC family like 1
  • Synonyms
    C19orf75, SIGLEC23P, SIGLECP7
  • Links
    NCBI Gene ID: 284369
    neXtProt AC: NX_Q8N7X8
    UniProt: Q8N7X8

  • Chr Location
    19q13.41; chr19:51251064-51269330 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    3 phenotype references
Male mice homozygous for a mutation are viable and show normal fertility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000013353 Ensembl Gene Model | MGI Sequence Detail 13897 C57BL/6J ±  kb
transcript ENSMUST00000013497 Ensembl | MGI Sequence Detail 3970 Not Applicable  
polypeptide ENSMUSP00000013497 Ensembl | MGI Sequence Detail 367 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
Other
Accession IDs
less
MGI:1922456
References
more
  • Summaries
    All 18
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:234235 Miyata H, et al., Genome engineering uncovers 54 evolutionarily conserved and testis-enriched genes that are not required for male fertility in mice. Proc Natl Acad Sci U S A. 2016 Jul 12;113(28):7704-10

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/23/2022
MGI 6.20
The Jackson Laboratory