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Nol9 Gene Detail
Summary
  • Symbol
    Nol9
  • Name
    nucleolar protein 9
  • Synonyms
    4632412I24Rik, 6030462G04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921285
    NCBI Gene: 74035
  • Gene Overview
    MyGene.info: NOL9
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:152039321-152061494 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 82.84 cM, cytoband E1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    118 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921285
protein coding gene Chr4:152039238-152061494 (.)
129S1/SvImJ MGP_129S1SvImJ_G0029170
protein coding gene Chr4:156138278-156160399 (+)
A/J MGP_AJ_G0029135
protein coding gene Chr4:149574399-149597955 (+)
AKR/J MGP_AKRJ_G0029083
protein coding gene Chr4:153654265-153676238 (+)
BALB/cJ MGP_BALBcJ_G0029151
protein coding gene Chr4:150060532-150083256 (+)
C3H/HeJ MGP_C3HHeJ_G0028872
protein coding gene Chr4:154218184-154242783 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029600
protein coding gene Chr4:161721340-161753648 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026846
protein coding gene Chr4:141941320-141963397 (+)
CAST/EiJ MGP_CASTEiJ_G0028285
protein coding gene Chr4:151559086-151583509 (+)
CBA/J MGP_CBAJ_G0028834
protein coding gene Chr4:166538351-166561054 (+)
DBA/2J MGP_DBA2J_G0028983
protein coding gene Chr4:149636201-149662512 (+)
FVB/NJ MGP_FVBNJ_G0028947
protein coding gene Chr4:148793950-148816985 (+)
LP/J MGP_LPJ_G0029073
protein coding gene Chr4:156052085-156077451 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028974
protein coding gene Chr4:169581969-169605848 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029632
protein coding gene Chr4:154188295-154211665 (+)
PWK/PhJ MGP_PWKPhJ_G0028005
protein coding gene Chr4:145706128-145730813 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027839
protein coding gene Chr4:148470332-148496038 (+)
WSB/EiJ MGP_WSBEiJ_G0028365
protein coding gene Chr4:154351095-154378684 (+)



Homology
more
  • Human Ortholog
    NOL9, nucleolar protein 9
  • Vertebrate Orthologs
    10
  • Human Ortholog
    NOL9, nucleolar protein 9
    Orthology source: HomoloGene, HGNC
  • Synonyms
    Grc3, NET6
  • Links
    NCBI Gene ID: 79707
    neXtProt AC: NX_Q5SY16
    UniProt: Q5SY16

  • Chr Location
    1p36.31; chr1:6521347-6554598 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 32589
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: NOL9
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000028948 Ensembl Gene Model | MGI Sequence Detail 22174 C57BL/6J ±  kb
transcript ENSMUST00000084116 Ensembl | MGI Sequence Detail 3722 Not Applicable  
polypeptide ENSMUSP00000081133 Ensembl | MGI Sequence Detail 714 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 75
    cDNA 75

    Microarray probesets 7
Other
Accession IDs
less
MGI:1924323, MGI:2140288, MGI:2140575
References
more
  • Summaries
    All 34
    Gene Ontology 4
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:196071 van der Weyden L, et al., Cancer of mice and men: old twists and new tails. J Pathol. 2013 May;230(1):4-16

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory