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Nol9 Gene Detail
Summary
  • Symbol
    Nol9
  • Name
    nucleolar protein 9
  • Synonyms
    4632412I24Rik, 6030462G04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921285
    NCBI Gene: 74035
  • Gene Overview
    MyGene.info: NOL9
Location & Maps
more
  • Sequence Map
    Chr4:152039321-152061494 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      22174 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 82.84 cM, cytoband E1
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    NOL9, nucleolar protein 9
  • Vertebrate Orthologs
    10
  • Human Ortholog
    NOL9, nucleolar protein 9
    Orthology source: HGNC, HomoloGene
  • Synonyms
    Grc3, NET6
  • Links
    NCBI Gene ID: 79707
    neXtProt AC: NX_Q5SY16

  • Chr Location
    1p36.31; chr1:6521347-6554598 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 32589
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: NOL9
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    18
  • Gene trapped
    15
  • Targeted
    3
  • Genomic Mutations
    3 involving Nol9
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010374 VEGA Gene Model | MGI Sequence Detail 22174 C57BL/6J ±  kb
transcript OTTMUST00000024183 VEGA | MGI Sequence Detail 2271 Not Applicable  
polypeptide OTTMUSP00000011119 VEGA | MGI Sequence Detail 671 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    118 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000011315 polynucleotide 5'-hydroxyl-kinase NOL9
  • EC
  • InterPro Domains
    IPR032319 Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain
Molecular
Reagents
less
  • All nucleic 74
    cDNA 74

    Microarray probesets 7
Other
Accession IDs
less
MGI:1924323, MGI:2140288, MGI:2140575
References
more
  • Summaries
    All 30
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory