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Ccdc175 Gene Detail
Summary
  • Symbol
    Ccdc175
  • Name
    coiled-coil domain containing 175
  • Synonyms
    4930403N07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921186
    NCBI Gene: 73936
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:72101300-72185029 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 30.20 cM, cytoband C3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    385 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921186
protein coding gene Chr12:72101291-72185029 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019823
protein coding gene Chr12:71919893-72006105 (-)
A/J MGP_AJ_G0019781
protein coding gene Chr12:69240561-69324044 (-)
AKR/J MGP_AKRJ_G0019757
protein coding gene Chr12:71320347-71407391 (-)
BALB/cJ MGP_BALBcJ_G0019761
protein coding gene Chr12:69721523-69801771 (-)
C3H/HeJ MGP_C3HHeJ_G0019566
protein coding gene Chr12:71784658-71864493 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020213
protein coding gene Chr12:74189845-74281441 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017833
protein coding gene Chr12:66726757-66803156 (-)
CAST/EiJ MGP_CASTEiJ_G0019118
protein coding gene Chr12:66537510-66629099 (-)
CBA/J MGP_CBAJ_G0019536
protein coding gene Chr12:76941093-77045413 (-)
DBA/2J MGP_DBA2J_G0019652
protein coding gene Chr12:69145490-69227596 (-)
FVB/NJ MGP_FVBNJ_G0019639
protein coding gene Chr12:68019115-68099622 (-)
LP/J MGP_LPJ_G0019724
protein coding gene Chr12:71936513-72020991 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019678
protein coding gene Chr12:80130789-80225916 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020248
protein coding gene Chr12:70826442-70916508 (-)
PWK/PhJ MGP_PWKPhJ_G0018883
protein coding gene Chr12:63441531-63525435 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018678
protein coding gene Chr12:65229695-65314368 (-)
WSB/EiJ MGP_WSBEiJ_G0019169
protein coding gene Chr12:71423918-71511532 (-)



Homology
more
  • Human Ortholog
    CCDC175, coiled-coil domain containing 175
  • Vertebrate Orthologs
    6
  • Human Ortholog
    CCDC175, coiled-coil domain containing 175
    Orthology source: HomoloGene, HGNC
  • Synonyms
    c14_5395, C14orf38
  • Links
    NCBI Gene ID: 729665
    neXtProt AC: NX_P0C221
    UniProt: P0C221

  • Chr Location
    14q23.1; chr14:59504212-59577276 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021086 Ensembl Gene Model | MGI Sequence Detail 83730 C57BL/6J ±  kb
transcript ENSMUST00000021494 Ensembl | MGI Sequence Detail 2622 Not Applicable  
polypeptide ENSMUSP00000021494 Ensembl | MGI Sequence Detail 822 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR038834 Coiled-coil domain-containing protein 175
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory