4930415O20Rik Gene Detail

Summary

• Symbol
  4930415O20Rik
• Name
  RIKEN cDNA 4930415O20 gene

• Feature Type
  protein coding gene
• IDs
  MGI:1921113
  NCBI Gene: 73863
• Alliance
  gene page

Location & Maps

• Sequence Map
  Chr15:98571004-98589580 bp, + strand
• From Ensembl annotation of GRCm38
  

  Mouse Genome Browser
  
  

• Download
  Sequence
    18577 bp   ±  kb flank
  
  
• Genome Browsers
  VEGA | Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 54.57 cM, cytoband F2
• Mapping Data
  2 experiments

Homology

• HomoloGene
  Vertebrate Homology Class 19174
  1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 macaque, rhesus
  
• Gene Tree
  4930415O20Rik
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  22 phenotype references
  

• All Mutations and Alleles
  38
• Chemically induced (other)
  1
• Gene trapped
  34
• Radiation induced
  2
• Targeted
  1
• Genomic Mutations
  3 involving 4930415O20Rik
• Incidental Mutations
  Mutagenetix , APF , CvDC
• Find Mice (IMSR)
  5 strains or lines available

Gene Ontology
(GO)
Classifications

• External Resources
  FuncBase

Expression

• cDNA Data
  9

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Interactions

• 4930415O20Rik interacts with 13 markers (Mir135a-1, Mir135a-2, Mir135b, ...) View All

Sequences &
Gene Models

• All Sequences
  11
• RefSeq
  2
• UniProt
  1
• CCDS
  CCDS49722.1
• UniGene
  66894

• Ensembl
  ENSMUSG00000022993 (Evidence)
• NCBI Gene
  73863

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000022993	Ensembl Gene Model | MGI Sequence Detail	18577	C57BL/6J
transcript	ENSMUST00000023728	Ensembl | MGI Sequence Detail	558	Not Applicable
polypeptide	ENSMUSP00000023728	Ensembl | MGI Sequence Detail	131	Not Applicable

Polymorphisms

• SNPs within 2kb
  145 from dbSNP Build 142

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR038775 Testis-expressed protein 49

Molecular
Reagents

• All nucleic 9

  cDNA 9

  
  

  Microarray probesets 2

References

• Summaries
  All 38

  Diseases 1

  Phenotypes 22
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9