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Spata48 Gene Detail
Summary
  • Symbol
    Spata48
  • Name
    spermatogenesis associated 48
  • Synonyms
    4930415F15Rik, post meiotic spermatogenesis 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921112
    NCBI Gene: 73862
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:11463247-11515192 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 6.93 cM, cytoband A2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    236 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921112
protein coding gene Chr11:11462094-11515192 (.)
129S1/SvImJ MGP_129S1SvImJ_G0018044
protein coding gene Chr11:8738697-8793942 (+)
A/J MGP_AJ_G0018017
protein coding gene Chr11:8432429-8489312 (+)
AKR/J MGP_AKRJ_G0017981
protein coding gene Chr11:8792658-8847198 (+)
BALB/cJ MGP_BALBcJ_G0017985
protein coding gene Chr11:8456180-8508617 (+)
C3H/HeJ MGP_C3HHeJ_G0017798
protein coding gene Chr11:8695439-8751656 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018437
protein coding gene Chr11:9036803-9097620 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016095
protein coding gene Chr11:8006224-8055698 (+)
CAST/EiJ MGP_CASTEiJ_G0017360
protein coding gene Chr11:8714665-8769624 (+)
CBA/J MGP_CBAJ_G0017773
protein coding gene Chr11:9678921-9737378 (+)
DBA/2J MGP_DBA2J_G0017883
protein coding gene Chr11:8374069-8428021 (+)
FVB/NJ MGP_FVBNJ_G0017875
protein coding gene Chr11:8285519-8338035 (+)
LP/J MGP_LPJ_G0017954
protein coding gene Chr11:8841591-8901603 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017901
protein coding gene Chr11:9386987-9464737 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018477
protein coding gene Chr11:8810686-8868580 (+)
PWK/PhJ MGP_PWKPhJ_G0017140
protein coding gene Chr11:8405548-8458552 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016937
protein coding gene Chr11:8662606-8718881 (+)
WSB/EiJ MGP_WSBEiJ_G0017414
protein coding gene Chr11:8571843-8630248 (+)



Homology
more
  • Human Ortholog
    SPATA48, spermatogenesis associated 48
  • Vertebrate Orthologs
    8
  • Human Ortholog
    SPATA48, spermatogenesis associated 48
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C7orf72
  • Links
    NCBI Gene ID: 100130988
    UniProt: A4D263

  • Chr Location
    7p12.2; chr7:50095861-50159256 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73862 NCBI Gene Model | MGI Sequence Detail 51946 C57BL/6J ±  kb
transcript NM_001347068 RefSeq | MGI Sequence Detail 1940 C57BL/6  
polypeptide Q5NC83 UniProt | EBI | MGI Sequence Detail 441 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027867 Spermatogenesis-associated protein 48
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 3
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Phenotypes 3
  • Earliest
    J:24282 Pourtier L, et al., Comparison of the sensitivity of C57BL/6J and AKR/J mice to airborne molecules of isovaleric acid and amyl acetate. Behav Genet. 1990 Jul;20(4):499-509
  • Latest
    J:195548 Brody MJ, et al., Ablation of the cardiac-specific gene leucine-rich repeat containing 10 (Lrrc10) results in dilated cardiomyopathy. PLoS One. 2012;7(12):e51621

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/11/2018
MGI 6.13
The Jackson Laboratory