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Fam98c Gene Detail
Summary
  • Symbol
    Fam98c
  • Name
    family with sequence similarity 98, member C
  • Synonyms
    1110006G06Rik, B230110F21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921083
    NCBI Gene: 73833
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:29152510-29156234 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 16.94 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    67 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921083
protein coding gene Chr7:29152510-29157104 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031972
protein coding gene Chr7:28059888-28063608 (-)
A/J MGP_AJ_G0031950
protein coding gene Chr7:27316912-27320634 (-)
AKR/J MGP_AKRJ_G0031882
protein coding gene Chr7:28018233-28021956 (-)
BALB/cJ MGP_BALBcJ_G0031957
protein coding gene Chr7:27485000-27488722 (-)
C3H/HeJ MGP_C3HHeJ_G0031676
protein coding gene Chr7:28423198-28426921 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032421
protein coding gene Chr7:28941892-28945615 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029473
protein coding gene Chr7:28377284-28380980 (-)
CAST/EiJ MGP_CASTEiJ_G0031011
protein coding gene Chr7:21724818-21728542 (-)
CBA/J MGP_CBAJ_G0031642
protein coding gene Chr7:30297662-30301385 (-)
DBA/2J MGP_DBA2J_G0031794
protein coding gene Chr7:27056657-27060380 (-)
FVB/NJ MGP_FVBNJ_G0031751
protein coding gene Chr7:27150247-27153966 (-)
LP/J MGP_LPJ_G0031874
protein coding gene Chr7:28351164-28354887 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031787
protein coding gene Chr7:29676568-29680291 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032451
protein coding gene Chr7:27511822-27515545 (-)
PWK/PhJ MGP_PWKPhJ_G0030736
protein coding gene Chr7:22102219-22106038 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030569
protein coding gene Chr7:18528807-18532577 (-)
WSB/EiJ MGP_WSBEiJ_G0031120
protein coding gene Chr7:27880059-27883786 (-)



Homology
more
  • Human Ortholog
    FAM98C, family with sequence similarity 98 member C
  • Vertebrate Orthologs
    6
  • Human Ortholog
    FAM98C, family with sequence similarity 98 member C
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 147965
    neXtProt AC: NX_Q17RN3
    UniProt: Q17RN3

  • Chr Location
    19q13.2; chr19:38403124-38409088 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000030590 Ensembl Gene Model | MGI Sequence Detail 3725 C57BL/6J ±  kb
transcript ENSMUST00000164589 Ensembl | MGI Sequence Detail 1293 Not Applicable  
polypeptide ENSMUSP00000131477 Ensembl | MGI Sequence Detail 344 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    7 Sequences
  • InterPro Domains
    IPR018797 FAM98
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 3
Other
Accession IDs
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MGI:1925765, MGI:2142034, MGI:2142170
References
more
  • Summaries
    All 24
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/30/2020
MGI 6.15
The Jackson Laboratory