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Prr27 Gene Detail
Summary
  • Symbol
    Prr27
  • Name
    proline rich 27
  • Synonyms
    4930432K09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921029
    NCBI Gene: 73779
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:87973556-87994245 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 43.56 cM, cytoband E2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    94 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921029
 protein coding gene Chr5:87973545-87994246 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029693
 protein coding gene Chr5:88784639-88806832 (+)
A/J MGP_AJ_G0029660
 protein coding gene Chr5:85166809-85187459 (+)
AKR/J MGP_AKRJ_G0029606
 protein coding gene Chr5:87988739-88009692 (+)
BALB/cJ MGP_BALBcJ_G0029669
 protein coding gene Chr5:86086178-86107054 (+)
C3H/HeJ MGP_C3HHeJ_G0029392
 protein coding gene Chr5:88388526-88411321 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030124
 protein coding gene Chr5:92443334-92464627 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027362
 protein coding gene Chr5:80784351-80802308 (+)
CAST/EiJ MGP_CASTEiJ_G0028802
 protein coding gene Chr5:87779571-87799964 (+)
CBA/J MGP_CBAJ_G0029361
 protein coding gene Chr5:95351463-95377968 (+)
DBA/2J MGP_DBA2J_G0029506
 protein coding gene Chr5:85350031-85360818 (+)
FVB/NJ MGP_FVBNJ_G0029466
 protein coding gene Chr5:84250745-84270048 (+)
LP/J MGP_LPJ_G0029594
 protein coding gene Chr5:89199995-89220188 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029495
 protein coding gene Chr5:100410523-100464428 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030157
 protein coding gene Chr5:87546524-87569028 (+)
PWK/PhJ MGP_PWKPhJ_G0028521
 protein coding gene Chr5:84321400-84342446 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028359
 protein coding gene Chr5:86964738-86985903 (+)
WSB/EiJ MGP_WSBEiJ_G0028881
 protein coding gene Chr5:87938786-87963335 (+)



Homology
more
  • Human Ortholog
    PRR27, proline rich 27
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRR27, proline rich 27
  • Synonyms
    C4orf40
  • Links
    NCBI Gene ID: 401137
    neXtProt AC: NX_Q6MZM9
    UniProt: Q6MZM9

  • Chr Location
    4q13.3; chr4:70133616-70176799 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    755
  • Tissues
    7
  • cDNA Data
    6
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73779 NCBI Gene Model | MGI Sequence Detail 20690 C57BL/6J ±  kb
transcript NM_001163551 RefSeq | MGI Sequence Detail 1325 ZRU/MplStud  
polypeptide NP_001157023 RefSeq | MGI Sequence Detail 352 ZRU/MplStud  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR033533 Proline-rich protein 27
Molecular
Reagents
less
  • All nucleic 8
    Genomic 2
    cDNA 6

    Microarray probesets 2
References
more
  • Summaries
    All 30
    Developmental Gene Expression 2
    Phenotypes 11
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:228563 Koscielny G, et al., The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Nucleic Acids Res. 2014 Jan;42(Database issue):D802-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory