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4833427G06Rik Gene Detail
Summary
  • Symbol
    4833427G06Rik
  • Name
    RIKEN cDNA 4833427G06 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921013
    NCBI Gene: 235345
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:51081313-51102078 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 27.81 cM, cytoband B
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    142 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921013
protein coding gene Chr9:51081115-51102078 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034796
protein coding gene Chr9:49994601-50017467 (-)
A/J MGP_AJ_G0034777
protein coding gene Chr9:48475564-48497582 (-)
AKR/J MGP_AKRJ_G0034705
protein coding gene Chr9:49487070-49507301 (-)
BALB/cJ MGP_BALBcJ_G0034769
protein coding gene Chr9:48221330-48247633 (-)
C3H/HeJ MGP_C3HHeJ_G0034479
protein coding gene Chr9:49980231-50002592 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035289
protein coding gene Chr9:51392580-51415901 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032202
protein coding gene Chr9:47935561-47955968 (-)
CAST/EiJ MGP_CASTEiJ_G0033801
protein coding gene Chr9:49920071-49942803 (-)
CBA/J MGP_CBAJ_G0034451
protein coding gene Chr9:53209906-53235097 (-)
DBA/2J MGP_DBA2J_G0034610
protein coding gene Chr9:48334401-48355047 (-)
FVB/NJ MGP_FVBNJ_G0034551
protein coding gene Chr9:47548416-47571066 (-)
LP/J MGP_LPJ_G0034691
protein coding gene Chr9:50360631-50384874 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034594
protein coding gene Chr9:54793845-54814148 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035310
protein coding gene Chr9:49475764-49496888 (-)
PWK/PhJ MGP_PWKPhJ_G0033506
protein coding gene Chr9:48308206-48329359 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033341
protein coding gene Chr9:49773049-49794902 (-)
WSB/EiJ MGP_WSBEiJ_G0033914
protein coding gene Chr9:49483702-49506428 (-)



Homology
more
  • Human Ortholog
    C11orf88, chromosome 11 open reading frame 88
  • Vertebrate Orthologs
    7
  • Human Ortholog
    C11orf88, chromosome 11 open reading frame 88
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 399949
    neXtProt AC: NX_Q6PI97
    UniProt: Q6PI97

  • Chr Location
    11q23.1; chr11:111514785-111537031 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 235345 NCBI Gene Model | MGI Sequence Detail 20766 C57BL/6J ±  kb
transcript NM_177702 RefSeq | MGI Sequence Detail 775 C57BL/6  
polypeptide Q80Y73 UniProt | EBI | MGI Sequence Detail 168 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 9
    cDNA 8
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 23
    Developmental Gene Expression 2
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:240319 Stauber M, et al., Identification of FOXJ1 effectors during ciliogenesis in the foetal respiratory epithelium and embryonic left-right organiser of the mouse. Dev Biol. 2017 Mar 15;423(2):170-188

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory