Thap1
Gene Detail

Symbol Name ID

Thap1 THAP domain containing, apoptosis associated protein 1 MGI:1921004

Synonyms

4833431A01Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 8

14.40 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr8:26158212-26162940 bp, + strand From VEGA annotation of GRCm38   4729 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:10005  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Gene Tree: Thap1

Human homologs

Human Homolog		THAP1, THAP domain containing, apoptosis associated protein 1
NCBI Gene ID		55145
neXtProt AC		NX_Q9NVV9
Human Synonyms		DYT6
Human Chr (Location)		8p11.21; chr8:42691817-42698474 (-)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human THAP1

Alleles and phenotypes

All alleles(14) : Gene trapped(14)

Gene Ontology (GO) classifications

All GO classifications: (11 annotations)

Process	cell cycle, endothelial cell proliferation, ...
Component	nucleus
Function	DNA binding, metal ion binding, ...

External Resources: FuncBase

Expression

Literature Summary: (2 records)
Data Summary: Results (52)    Tissues (31)    Images (5)
Theiler Stages: 17, 21, 23

Assay Type	Results
RNA in situ	52

cDNA source data(25)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(25) cDNA(25)
Microarray probesets(3)

Other database links

VEGA Gene Model	OTTMUSG00000031061 (Evidence)
Ensembl Gene Model	ENSMUSG00000037214 (Evidence)
Entrez Gene	73754 (Evidence)
UniGene	383241
DFCI	TC1582842, TC1673062
DoTS	DT.110874365, DT.94185102, DT.99856590
NIA Mouse Gene Index	U042895
Consensus CDS Project	CCDS22208.1
International Mouse Knockout Project Status	Thap1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000031061	VEGA Gene Model | MGI Sequence Detail	4729	C57BL/6J
transcript	OTTMUST00000076951	VEGA | MGI Sequence Detail	1013	Not Applicable
polypeptide	OTTMUSP00000040574	VEGA | MGI Sequence Detail	210	Not Applicable

All sequences(29) RefSeq(2) UniProt(2)

Protein-related information

Resource	ID	Description
InterPro	IPR026516	THAP domain-containing protein 1
InterPro	IPR006612	Zinc finger, C2CH-type
Protein Ontology	PR:000016303	THAP domain-containing protein 1

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:152068 Friedel RH, et al., EUCOMM--the European conditional mouse mutagenesis program. Brief Funct Genomic Proteomic. 2007 Sep;6(3):180-5
All references(32)

Other accession IDs

MGI:2142789