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Lce1l Gene Detail
Summary
  • Symbol
    Lce1l
  • Name
    late cornified envelope 1L
  • Synonyms
    1110008K04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920980
    NCBI Gene: 73730
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:92757256-92758593 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 40.14 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    15 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920980
protein coding gene Chr3:92757256-92758593 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027520
protein coding gene Chr3:93312067-93313404 (-)
A/J MGP_AJ_G0027487
protein coding gene Chr3:90376544-90378002 (-)
AKR/J MGP_AKRJ_G0027452
protein coding gene Chr3:92496131-92497468 (-)
BALB/cJ MGP_BALBcJ_G0027495
protein coding gene Chr3:90186024-90187361 (-)
C3H/HeJ MGP_C3HHeJ_G0027233
protein coding gene Chr3:92710471-92711808 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027937
protein coding gene Chr3:96864321-96865658 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025286
protein coding gene Chr3:87002034-87003383 (-)
CAST/EiJ MGP_CASTEiJ_G0026680
protein coding gene Chr3:92137318-92138655 (-)
CBA/J MGP_CBAJ_G0027209
protein coding gene Chr3:100181869-100183206 (-)
DBA/2J MGP_DBA2J_G0027346
protein coding gene Chr3:89703561-89704898 (-)
FVB/NJ MGP_FVBNJ_G0027314
protein coding gene Chr3:87866116-87867453 (-)
LP/J MGP_LPJ_G0027454
protein coding gene Chr3:94532527-94533864 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027340
protein coding gene Chr3:106484662-106485999 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027997
protein coding gene Chr3:92227320-92228657 (-)
PWK/PhJ MGP_PWKPhJ_G0026411
protein coding gene Chr3:89582652-89583989 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026232
protein coding gene Chr3:90564404-90565701 (-)
WSB/EiJ MGP_WSBEiJ_G0026763
protein coding gene Chr3:92598711-92600048 (-)



Homology
more
  • Human Ortholog
    LCE1A, late cornified envelope 1A
  • Vertebrate Orthologs
    5
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LCE1A, late cornified envelope 1A
  • Synonyms
    LEP1
  • Links
    NCBI Gene ID: 353131
    neXtProt AC: NX_Q5T7P2
    UniProt: Q5T7P2

  • Chr Location
    1q21.3; chr1:152827473-152828097 (+)  GRCh38.p7

  • Human Ortholog
    LCE1B, late cornified envelope 1B
  • Synonyms
    LEP2, SPRL2A
  • Links
    NCBI Gene ID: 353132
    neXtProt AC: NX_Q5T7P3
    UniProt: Q5T7P3

  • Chr Location
    1q21.3; chr1:152811971-152813109 (+)  GRCh38.p7

  • Human Ortholog
    LCE1C, late cornified envelope 1C
  • Synonyms
    LEP3
  • Links
    NCBI Gene ID: 353133
    neXtProt AC: NX_Q5T751
    UniProt: Q5T751

  • Chr Location
    1q21.3; chr1:152804835-152806631 (-)  GRCh38.p7

  • Human Ortholog
    LCE1E, late cornified envelope 1E
  • Synonyms
    LEP5
  • Links
    NCBI Gene ID: 353135
    neXtProt AC: NX_Q5T753
    UniProt: Q5T753

  • Chr Location
    1q21.3; chr1:152786277-152788426 (+)  GRCh38.p7

  • Human Ortholog
    LCE1F, late cornified envelope 1F
  • Synonyms
    LEP6
  • Links
    NCBI Gene ID: 353137
    neXtProt AC: NX_Q5T754
    UniProt: Q5T754

  • Chr Location
    1q21.3; chr1:152776372-152776969 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Lce1l
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 73730 NCBI Gene Model | MGI Sequence Detail 1338 C57BL/6J ±  kb
transcript NM_028628 RefSeq | MGI Sequence Detail 670 C57BL/6  
polypeptide NP_082904 RefSeq | MGI Sequence Detail 135 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR028205 Late cornified envelope protein
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 3
Other
Accession IDs
less
MGI:2139699
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/09/2022
MGI 6.21
The Jackson Laboratory