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Lce1a2 Gene Detail
Summary
  • Symbol
    Lce1a2
  • Name
    late cornified envelope 1A2
  • Synonyms
    1110004E04Rik, Sprrl2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920972
    NCBI Gene: 73722
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:92668613-92670315 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 40.14 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920972
protein coding gene Chr3:92668613-92670315 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027508
protein coding gene Chr3:93126746-93128448 (-)
A/J MGP_AJ_G0027475
protein coding gene Chr3:90196306-90198123 (-)
AKR/J MGP_AKRJ_G0027440
protein coding gene Chr3:92311192-92312894 (-)
BALB/cJ MGP_BALBcJ_G0027483
protein coding gene Chr3:90007812-90009519 (-)
C3H/HeJ MGP_C3HHeJ_G0027223
protein coding gene Chr3:92533237-92534939 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027927
protein coding gene Chr3:96670283-96671985 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025274
protein coding gene Chr3:86802096-86802810 (-)
CAST/EiJ MGP_CASTEiJ_G0026668
protein coding gene Chr3:91918863-91925086 (-)
CBA/J MGP_CBAJ_G0027197
protein coding gene Chr3:99992811-99994513 (-)
DBA/2J MGP_DBA2J_G0027335
protein coding gene Chr3:89517070-89518772 (-)
FVB/NJ MGP_FVBNJ_G0027303
protein coding gene Chr3:87685143-87686845 (-)
LP/J MGP_LPJ_G0027443
protein coding gene Chr3:94345484-94347186 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027328
protein coding gene Chr3:106275712-106277418 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027986
protein coding gene Chr3:92039974-92041676 (-)
PWK/PhJ MGP_PWKPhJ_G0026401
protein coding gene Chr3:89374946-89375676 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0026753
protein coding gene Chr3:92425305-92427011 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Lce1a2
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 73722 NCBI Gene Model | MGI Sequence Detail 1703 C57BL/6J ±  kb
transcript NM_028625 RefSeq | MGI Sequence Detail 715 C57BL/6  
polypeptide NP_082901 RefSeq | MGI Sequence Detail 149 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR028205 Late cornified envelope protein
    IPR026075 Small proline-rich protein/late cornified envelope protein
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 2
References
more
  • Summaries
    All 25
    Developmental Gene Expression 6
    Diseases 1
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:235073 Miyai M, et al., Transcription Factor MafB Coordinates Epidermal Keratinocyte Differentiation. J Invest Dermatol. 2016 Sep;136(9):1848-57

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/19/2020
MGI 6.15
The Jackson Laboratory