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Cimip5 Gene Detail
Summary
  • Symbol
    Cimip5
  • Name
    ciliary microtubule inner protein 5
  • Synonyms
    2410004P03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920917
    NCBI Gene: 73667
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:17054958-17061759 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 8.04 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    369 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920917
 protein coding gene Chr12:17053320-17061759 (-)
129S1/SvImJ ENSMUSG00200022186
 protein coding gene Chr12:14094976-14103306 (-)
A/J ENSMUSG00195017283
 protein coding gene Chr12:14106999-14115339 (-)
AKR/J ENSMUSG00220024921
 protein coding gene Chr12:14191538-14199878 (-)
BALB/cJ ENSMUSG00180008784
 protein coding gene Chr12:14085630-14093969 (-)
C3H/HeJ ENSMUSG00175005545
 protein coding gene Chr12:14116930-14125262 (-)
C57BL/6NJ ENSMUSG00215005290
 protein coding gene Chr12:13888199-13896609 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017632
 protein coding gene Chr12:13415260-13423717 (-)
CAST/EiJ ENSTCUG00005005583
 protein coding gene Chr12:13605561-13613925 (-)
CBA/J ENSMUSG00210007445
 protein coding gene Chr12:14128792-14137123 (-)
DBA/2J ENSMUSG00185003375
 protein coding gene Chr12:14041571-14049901 (-)
FVB/NJ ENSMUSG00205001415
 protein coding gene Chr12:13994042-14002372 (-)
JF1/MsJ ENSUMUG00000007936
 protein coding gene Chr12:13959604-13968011 (-)
LP/J ENSMUSG00230021141
 protein coding gene Chr12:15863894-15872225 (-)
NOD/ShiLtJ ENSMUSG00190012979
 protein coding gene Chr12:15323812-15332145 (-)
NZO/HlLtJ ENSMUSG00225029756
 protein coding gene Chr12:17966632-17974962 (-)
PWK/PhJ ENSLUMG00010003982
 protein coding gene Chr12:13733800-13742145 (-)
SPRET/EiJ ENSMSPG00010002803
 protein coding gene Chr12:14713758-14719858 (-)
WSB/EiJ ENSIUOG00005001504
 protein coding gene Chr12:14107035-14115366 (-)



Homology
more
  • Human Ortholog
    CIMIP5, ciliary microtubule inner protein 5
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CIMIP5, ciliary microtubule inner protein 5
  • Synonyms
    C2orf50
  • Links
    NCBI Gene ID: 130813
    UniProt: Q96LR7

  • Chr Location
    2p25.1; chr2:11133009-11154576 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73667 NCBI Gene Model | MGI Sequence Detail 6802 C57BL/6J ±  kb
transcript NM_001201332 RefSeq | MGI Sequence Detail 1626 C57BL/6  
polypeptide NP_001188262 RefSeq | MGI Sequence Detail 205 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR020339 Ciliary microtubule inner protein 1-like
Molecular
Reagents
less
  • All nucleic 6
    Genomic 2
    cDNA 4

    Microarray probesets 2
Other
Accession IDs
less
MGI:7716859
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory