Spns1
Gene Detail

Symbol Name ID

Spns1 spinster homolog 1 MGI:1920908

Synonyms

2210013K02Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 7

69.01 cM, cytoband F4
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr7:126370060-126377450 bp, - strand From VEGA annotation of GRCm38   7391 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Mammalian homology

human; rat; cattle; chimpanzee; dog, domestic    (Mammalian Orthology)
Comparative Map (Mouse/Human Spns1 ± 2 cM)

Gene Tree: Spns1

Human ortholog

SPNS1 spinster homolog 1 (Drosophila) NCBI Gene ID 83985
Human Synonyms: HSpin1, LAT, nrs, PP2030, SPIN1, SPINL
Human Chr16:28986096-28995869 bp, + strand Reference GRCh37.p2 Primary Assembly

Alleles and phenotypes

All alleles(10) : Targeted(3) Gene trapped(7)
 

Homozygous mutation results in lethality before weaning.

 

Gene Ontology (GO) classifications

All GO classifications: (9 annotations)

Process	lipid transport, transmembrane transport, ...
Component	integral to membrane, membrane, ...
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (10)    Tissues (6)    Images (5)
Theiler Stages: 28

Assay Type	Results
RNA in situ	10

cDNA source data(191)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(192) cDNA(192)
Microarray probesets(3)

Other database links

VEGA Gene Model	OTTMUSG00000031445 (Evidence)
Ensembl Gene Model	ENSMUSG00000030741 (Evidence)
Entrez Gene	73658 (Evidence)
UniGene	11112
DFCI	TC1573509, TC1602600, TC1607676
DoTS	DT.101334322, DT.101401722, DT.102557674, DT.533070
NIA Mouse Gene Index	U029240
Consensus CDS Project	CCDS21826.1
International Mouse Knockout Project Status	Spns1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000031445	VEGA Gene Model | MGI Sequence Detail	7391	C57BL/6J
transcript	OTTMUST00000077915	VEGA | MGI Sequence Detail	2219	Not Applicable
polypeptide	OTTMUSP00000041308	VEGA | MGI Sequence Detail	528	Not Applicable

All sequences(88) RefSeq(3) UniProt(5)

Polymorphisms

SNPs(51 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR011701	Major facilitator superfamily
InterPro	IPR020846	Major facilitator superfamily domain
InterPro	IPR016196	Major facilitator superfamily domain, general substrate transporter
Protein Ontology	PR:000015550	protein spinster 1

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(37)