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2210408F21Rik Gene Detail
Summary
  • Symbol
    2210408F21Rik
  • Name
    RIKEN cDNA 2210408F21 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920902
    NCBI Gene: 73652
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:31197286-31314330 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 12.56 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    477 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920902
 lncRNA gene Chr6:31197244-31346635 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015626
 unclassified non-coding RNA gene Chr6:29126695-29249367 (+)
A/J MGP_AJ_G0015602
 unclassified non-coding RNA gene Chr6:27900988-28018972 (+)
AKR/J MGP_AKRJ_G0015565
 unclassified non-coding RNA gene Chr6:28830427-28949857 (+)
BALB/cJ MGP_BALBcJ_G0015564
 unclassified non-coding RNA gene Chr6:28023728-28141547 (+)
C3H/HeJ MGP_C3HHeJ_G0015386
 unclassified non-coding RNA gene Chr6:28843365-28964810 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016017
 unclassified non-coding RNA gene Chr6:29953103-30077073 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013751
 unclassified non-coding RNA gene Chr6:26062285-26182847 (+)
CAST/EiJ MGP_CASTEiJ_G0014942
 unclassified non-coding RNA gene Chr6:28618933-28743103 (+)
CBA/J MGP_CBAJ_G0015367
 unclassified non-coding RNA gene Chr6:31125683-31246092 (+)
DBA/2J MGP_DBA2J_G0015461
 unclassified non-coding RNA gene Chr6:27798943-27922772 (+)
FVB/NJ MGP_FVBNJ_G0015468
 unclassified non-coding RNA gene Chr6:27594101-27713670 (+)
LP/J MGP_LPJ_G0015542
 unclassified non-coding RNA gene Chr6:29319316-29439269 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015491
 unclassified non-coding RNA gene Chr6:33517318-33639646 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016060
 unclassified non-coding RNA gene Chr6:28725813-28850096 (+)
PWK/PhJ MGP_PWKPhJ_G0014726
 unclassified non-coding RNA gene Chr6:27376153-27502679 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014515
 unclassified non-coding RNA gene Chr6:28410963-28535556 (+)
WSB/EiJ MGP_WSBEiJ_G0015046
 unclassified non-coding RNA gene Chr6:28648529-28772602 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    20
Sequences &
Gene Models
less
  • All Sequences
    119
  • RefSeq
    6
Representative SequencesLengthStrain/SpeciesFlank
genomic 73652 NCBI Gene Model | MGI Sequence Detail 117045 C57BL/6J ±  kb
transcript NR_040257 RefSeq | MGI Sequence Detail 1013 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20
References
more
  • Summaries
    All 12
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345102 Zhu J, et al., The 2210408F21Rik/miR-1968-5p/Hras axis regulates synapse-related proteins in a mouse model of depressive-like behaviors through a ceRNA mechanism. Behav Brain Res. 2023 Jun 5;447:114440
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory